RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ZFYVE19Q96K21 471 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 ANAPC2Q9UJX6 822 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 TTC34A8MYJ7 566 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 HTRA2O43464 458 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 ANXA5P08758 320 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 CTNNB1P35222 781 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 PREPP48147 710 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 CLCN4P51793 760 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 CASP9P55211 416 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 ESRRGP62508 458 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 RCAN2Q14206 197 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 LRRC26Q2I0M4 334 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 GALNT10Q86SR1 603 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 STK32CQ86UX6 486 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 LILRA3Q8N6C8 439 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 MTERF1Q99551 399 aaKnown RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 PAIP1Q9H074 479 aaKnown RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 RPF2Q9H7B2 306 aaKnown RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 DNAAF2Q9NVR5 837 aaKnown RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 PKD2L2Q9NZM6 624 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 RIMKLBQ9ULI2 386 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 ANKRD36A6QL64 1941 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 PLK4O00444 970 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 ADH1AP07327 375 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 C8BP07358 591 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 LSAMPQ13449 338 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 ATP1A4Q13733 1029 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 SYTL3Q4VX76 610 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 GPRC6AQ5T6X5 926 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 TSPAN14Q8NG11 270 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 FAM162AQ96A26 154 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 OR52E6Q96RD3 313 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 LRTM1Q9HBL6 345 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 VPS4AQ9UN37 437 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 COQ6Q9Y2Z9 468 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 TCRBV3S1A0A5B6 114 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 RGS14O43566 566 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 PENKP01210 267 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRAP1Q12931 704 aaKnown RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRAF3Q13114 568 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 PTCHD3Q3KNS1 767 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 CACHD1Q5VU97 1274 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 ANKRD26P1Q6NSI1 321 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 PRMT9Q6P2P2 845 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 ITFG1Q8TB96 612 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 RMND5BQ96G75 393 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 CHID1Q9BWS9 393 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 NUSAP1Q9BXS6 441 aaKnown RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 CD244Q9BZW8 370 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 PAK6Q9NQU5 681 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 VAPAQ9P0L0 249 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 FAM234BA2RU67 622 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 K7EPI3 171 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 GREM1O60565 184 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 E2F6O75461 281 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 GNRH1P01148 92 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 ASLP04424 464 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 OR56A5P0C7T3 313 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 PABPC1P11940 636 aaKnown RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 NSG1P42857 185 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 ATP4BP51164 291 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 PTSQ03393 145 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 TPRG1Q6ZUI0 275 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 ERMP1Q7Z2K6 904 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 GPR156Q8NFN8 814 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 EGLN2Q96KS0 407 aa11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 CXXC1Q9P0U4 656 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 LSM1O15116 133 aaKnown RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 CLOCKO15516 846 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 LEFTY1O75610 366 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 CPSF4O95639 269 aaKnown RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 MYCLP1P12525 358 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 HLA-EP13747 358 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 PCSK6P29122 969 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 ACOX1Q15067 660 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 TCEA2Q15560 299 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 HS3ST5Q8IZT8 346 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 MARVELD2Q8N4S9 558 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 MINDY1Q8N5J2 469 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 METTL25Q8N6Q8 603 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 C12orf76Q8N812 135 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 RHBDF1Q96CC6 855 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 CGREF1Q99674 301 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 HERC2P3Q9BVR0 1158 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 ACTR3BQ9P1U1 418 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 INVSQ9Y283 1065 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 SMIM31A0A1B0GVY4 71 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 LDLRP01130 860 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 TFAP2AP05549 437 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 MSH3P20585 1137 aa11.28□□□□□ -0.6
ARHGEF1-220ENST00000600274 NR4A1P22736 598 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms