RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SKA2Q8WVK7 121 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-206ENST00000599699 UBXN4Q92575 508 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 FAM136AQ96C01 138 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 PWWP2AQ96N64 755 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 CD180Q99467 661 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 MAP3K3Q99759 626 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 NAT9Q9BTE0 207 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 FBXO6Q9NRD1 293 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-206ENST00000599699 POLG2Q9UHN1 485 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 ACSL6Q9UKU0 697 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 SNX24Q9Y343 169 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 NIPSNAP2O75323 286 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 TTC4O95801 387 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 S1PR4O95977 384 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 F7P08709 466 aaPredicted RBP27.39■■□□□ 1.98
SSBP4-206ENST00000599699 CHRM3P20309 590 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 CD82P27701 267 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 ARL4CP56559 192 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 HIF1AQ16665 826 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 HSP90AA5PQ58FG0 334 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 ZNF789Q5FWF6 425 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 KCNMB4Q86W47 210 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 LMNTD2Q8IXW0 634 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 OR5K2Q8NHB8 316 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 NRTNQ99748 197 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 FAM167BQ9BTA0 163 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 FBXO8Q9NRD0 319 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 IARS2Q9NSE4 1012 aaKnown RBP27.39■■□□□ 1.98
SSBP4-206ENST00000599699 CDYLQ9Y232 598 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 PCDHB11Q9Y5F2 797 aa27.39■■□□□ 1.98
SSBP4-206ENST00000599699 LAMA5O15230 3695 aa27.39■■□□□ 1.97
SSBP4-206ENST00000599699 IGHV5-51A0A0C4DH38 117 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 FAM187AA6NFU0 413 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 TLCD2A6NGC4 264 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 E5RI56 91 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 NDC80O14777 642 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 POLR1CO15160 346 aaPredicted RBP27.38■■□□□ 1.97
SSBP4-206ENST00000599699 PKMP14618 531 aaKnown RBP27.38■■□□□ 1.97
SSBP4-206ENST00000599699 SLC1A2P43004 574 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 RPL21P46778 160 aaKnown RBP27.38■■□□□ 1.97
SSBP4-206ENST00000599699 ADARP55265 1226 aaKnown RBP27.38■■□□□ 1.97
SSBP4-206ENST00000599699 CLN3Q13286 438 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 SPANXN3Q5MJ09 141 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 CEACAM20Q6UY09 585 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 UNC5BQ8IZJ1 945 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 KLHL6Q8WZ60 621 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 CFAP36Q96G28 342 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 TEFMQ96QE5 360 aaKnown RBP27.38■■□□□ 1.97
SSBP4-206ENST00000599699 CCDC68Q9H2F9 335 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 APMAPQ9HDC9 416 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 LHX6Q9UPM6 363 aa27.38■■□□□ 1.97
SSBP4-206ENST00000599699 MATN2O00339 956 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 KDM1AO60341 852 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 SLCO2B1O94956 709 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 RPN2P04844 631 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 LIPCP11150 499 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 ELK3P41970 407 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 KPNA2P52292 529 aaKnown RBP27.37■■□□□ 1.97
SSBP4-206ENST00000599699 SH3BP2P78314 561 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 TGIF1Q15583 401 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 PLEKHS1Q5SXH7 462 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 IGDCC3Q8IVU1 814 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 SIDT2Q8NBJ9 832 aaKnown RBP27.37■■□□□ 1.97
SSBP4-206ENST00000599699 BBOF1Q8ND07 529 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 GABPB2Q8TAK5 448 aaPredicted RBP27.37■■□□□ 1.97
SSBP4-206ENST00000599699 ZNF592Q92610 1267 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 OR6C1Q96RD1 312 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 DPH5Q9H2P9 285 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 SIDT1Q9NXL6 827 aaKnown RBP27.37■■□□□ 1.97
SSBP4-206ENST00000599699 FBXO5Q9UKT4 447 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 ICKQ9UPZ9 632 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 CHMP2BQ9UQN3 213 aa27.37■■□□□ 1.97
SSBP4-206ENST00000599699 STMND1H3BQB6 276 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 BTN3A3O00478 584 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 BTN3A1O00481 513 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 RAD51CO43502 376 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 URI1O94763 535 aaPredicted RBP27.36■■□□□ 1.97
SSBP4-206ENST00000599699 ERVK-10P10266 1014 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 NELFEP18615 380 aaKnown RBP27.36■■□□□ 1.97
SSBP4-206ENST00000599699 SHMT2P34897 504 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 TRIM44Q96DX7 344 aaPredicted RBP27.36■■□□□ 1.97
SSBP4-206ENST00000599699 CRELD1Q96HD1 420 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 ERP44Q9BS26 406 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 ZPBPQ9BS86 351 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 PPANQ9NQ55 473 aaKnown RBP27.36■■□□□ 1.97
SSBP4-206ENST00000599699 ZC3H7BQ9UGR2 993 aaKnown RBP27.36■■□□□ 1.97
SSBP4-206ENST00000599699 TSR3Q9UJK0 312 aaKnown RBP27.36■■□□□ 1.97
SSBP4-206ENST00000599699 PLAGL1Q9UM63 463 aa27.36■■□□□ 1.97
SSBP4-206ENST00000599699 CDH3P22223 829 aa27.35■■□□□ 1.97
SSBP4-206ENST00000599699 UCNP55089 124 aa27.35■■□□□ 1.97
SSBP4-206ENST00000599699 CKAP4Q07065 602 aaKnown RBP27.35■■□□□ 1.97
SSBP4-206ENST00000599699 CALCOCO2Q13137 446 aa27.35■■□□□ 1.97
SSBP4-206ENST00000599699 UNC5DQ6UXZ4 953 aa27.35■■□□□ 1.97
SSBP4-206ENST00000599699 LRRC39Q96DD0 335 aa27.35■■□□□ 1.97
SSBP4-206ENST00000599699 ELMO2Q96JJ3 720 aa27.35■■□□□ 1.97
SSBP4-206ENST00000599699 POMT2Q9UKY4 750 aa27.35■■□□□ 1.97
SSBP4-206ENST00000599699 C2orf74A8MZ97 194 aa27.34■■□□□ 1.97
SSBP4-206ENST00000599699 MPP1Q00013 466 aa27.34■■□□□ 1.97
SSBP4-206ENST00000599699 TTC23LQ6PF05 361 aa27.34■■□□□ 1.97
SSBP4-206ENST00000599699 FBXO38Q6PIJ6 1188 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms