RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-223	ENST00000598717	TRIM48	Q8IWZ4	208 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	SLC25A45	Q8N413	288 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	CCDC63	Q8NA47	563 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	OR2I1P	Q8NGU4	316 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	RHEBL1	Q8TAI7	183 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	MCOLN3	Q8TDD5	553 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	TCP10L	Q8TDR4	215 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	SAP25	Q8TEE9	199 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	PTER	Q96BW5	349 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	HIST1H2AH	Q96KK5	128 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	HIST1H2AJ	Q99878	128 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	SELENOS	Q9BQE4	189 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	H2AFJ	Q9BTM1	129 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	SLC12A9	Q9BXP2	914 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	MRPL46	Q9H2W6	279 aa	Known RBP	18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	TRIT1	Q9H3H1	467 aa	Known RBP	18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	PARVB	Q9HBI1	364 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	ADAMTS6	Q9UKP5	1117 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	IKZF3	Q9UKT9	509 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	PLLP	Q9Y342	182 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	COLEC10	Q9Y6Z7	277 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	CUL9	Q8IWT3	2517 aa		18.82	■□□□□ 0.6
LTBP4-223	ENST00000598717	OR52A4P	A6NMU1	304 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	SYCE1L	A8MT33	242 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	GFY	I3L273	518 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	LRP3	O75074	770 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	C1orf105	O95561	183 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	ENO2	P09104	434 aa	Predicted RBP	18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	MTHFD1	P11586	935 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	NDUFS1	P28331	727 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	OR4D1	Q15615	310 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	TECRL	Q5HYJ1	363 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	GATAD2A	Q86YP4	633 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	GPSM1	Q86YR5	675 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	TBC1D21	Q8IYX1	336 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	PHC3	Q8NDX5	983 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	MVB12B	Q9H7P6	319 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	SEMA4G	Q9NTN9	838 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	CPSF2	Q9P2I0	782 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	XPR1	Q9UBH6	696 aa		18.81	■□□□□ 0.6
LTBP4-223	ENST00000598717	TMEM120B	A0PK00	339 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	LNP1	A1A4G5	178 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	TM9SF1	O15321	606 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	KERA	O60938	352 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	ZWINT	O95229	277 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	VIP	P01282	170 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	S100B	P04271	92 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	XRCC1	P18887	633 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	TAC1	P20366	129 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	RPA3	P35244	121 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	BDKRB1	P46663	353 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	RPIA	P49247	311 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	BIRC2	Q13490	618 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	SUZ12	Q15022	739 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	SF3A2	Q15428	464 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	DUS1L	Q6P1R4	473 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	SBSN	Q6UWP8	590 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	SLC9B2	Q86UD5	537 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	DCUN1D3	Q8IWE4	304 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	NAGS	Q8N159	534 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	AVL9	Q8NBF6	648 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	OR5AR1	Q8NGP9	310 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	OR5K2	Q8NHB8	316 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	MAPK15	Q8TD08	544 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	EXT2	Q93063	718 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	RAD51AP1	Q96B01	352 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	FAM111A	Q96PZ2	611 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	DUSP23	Q9BVJ7	150 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	STN1	Q9H668	368 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	UTP6	Q9NYH9	597 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	NKIRAS1	Q9NYS0	192 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	NLGN3	Q9NZ94	848 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	SIRPG	Q9P1W8	387 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	ZNF624	Q9P2J8	865 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	POLG2	Q9UHN1	485 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	MID2	Q9UJV3	735 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	PDE10A	Q9Y233	779 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	TDRKH	Q9Y2W6	561 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	OARD1	Q9Y530	152 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	TP53BP1	Q12888	1972 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	PI4KA	P42356	2102 aa		18.8	■□□□□ 0.6
LTBP4-223	ENST00000598717	PCDH15	Q96QU1	1955 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	ARHGEF33	A8MVX0	844 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	SUPT3H	B4E1H0	165 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	PCDHGA12	O60330	932 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	KDM1A	O60341	852 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	PLIN3	O60664	434 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	SUPT3H	O75486	399 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	PROC	P04070	461 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	ZNF883	P0CG24	379 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	SLC19A1	P41440	591 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	CSRP2	Q16527	193 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	PHKG1	Q16816	387 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	C6orf132	Q5T0Z8	1188 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	KANSL1	Q7Z3B3	1105 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	RASGRP3	Q8IV61	690 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	SFRP1	Q8N474	314 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	ANKRD42	Q8N9B4	389 aa		18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	FBXO15	Q8NCQ5	510 aa	Predicted RBP	18.79	■□□□□ 0.6
LTBP4-223	ENST00000598717	ARMC2	Q8NEN0	867 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms