RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 EGFLAMQ63HQ2 1017 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 TRIM74Q86UV6 250 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 FAM156AQ8NDB6 213 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 FGF14Q92915 247 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC52A3Q9NQ40 469 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 PRSS16Q9NQE7 514 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 RIC8BQ9NVN3 520 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 THAP10Q9P2Z0 257 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 LRRK1Q38SD2 2015 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 LOC730098B7Z3J9 87 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 KPNA5O15131 536 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 FKBP6O75344 327 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 SLCO2B1O94956 709 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 FTH1P02794 183 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 EPHX1P07099 455 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 ENO2P09104 434 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 C6P13671 934 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 HMOX2P30519 316 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 GGT5P36269 586 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 ZFP36L2P47974 494 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 AP2B1P63010 937 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 ERVK-8P63133 956 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 CDKL4Q5MAI5 379 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 C8orf82Q6P1X6 216 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 RNF111Q6ZNA4 994 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 LRRC74BQ6ZQY2 392 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 YAF2Q8IY57 180 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 ASZ1Q8WWH4 475 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 CCT7Q99832 543 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC39A3Q9BRY0 314 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 FARSBQ9NSD9 589 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 ADA2Q9NZK5 511 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 MAP10Q9P2G4 905 aa16.66■□□□□ 0.26
SHKBP1-216ENST00000598201 SYNCRIPO60506 623 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 EPB42P16452 691 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 PSMC3P17980 439 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 UFM1P61960 85 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 CDKL1Q00532 357 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 ELP6Q0PNE2 266 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 ATP6AP1LQ52LC2 224 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 METTL2BQ6P1Q9 378 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 AAGABQ6PD74 315 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 BLOC1S3Q6QNY0 202 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 CYP2U1Q7Z449 544 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 RASGRP3Q8IV61 690 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 FNDC5Q8NAU1 212 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 UCMAQ8WVF2 138 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 FOXJ1Q92949 421 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 NTMT1Q9BV86 223 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 BRINP2Q9C0B6 783 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 PFDN4Q9NQP4 134 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 CCL27Q9Y4X3 112 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 C2CD4DB7Z1M9 353 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 LSM1O15116 133 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 BAG2O95816 211 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 TCN1P20061 433 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 ME2P23368 584 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 GDI1P31150 447 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 PREPP48147 710 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 PSMD8P48556 350 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 MRPL19P49406 292 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 PRLHRP49683 370 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC44A4Q53GD3 710 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 TMEM220Q6QAJ8 160 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 ERN2Q76MJ5 926 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 KBTBD6Q86V97 674 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 JADE3Q92613 823 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 PYCR2Q96C36 320 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 NUS1Q96E22 293 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC32A1Q9H598 525 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 NMRK1Q9NWW6 199 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 ANGPTL2Q9UKU9 493 aa16.65■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC16A5O15375 505 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 VHLP40337 213 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 P2RY2P41231 377 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 WASP42768 502 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 SLC6A12P48065 614 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 ATXN3P54252 364 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 ABRQ12979 859 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 SP140Q13342 867 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 PTCHD3Q3KNS1 767 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 HACD2Q6Y1H2 254 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 NEK10Q6ZWH5 1172 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 PPP1R16AQ96I34 528 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 ZNF570Q96NI8 536 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 TRIM54Q9BYV2 358 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 KLQ9UEF7 1012 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 CROTQ9UKG9 612 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 LRRC42Q9Y546 428 aa16.64■□□□□ 0.25
SHKBP1-216ENST00000598201 BBIP1A8MTZ0 92 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 H3BNX3 289 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 ATG13O75143 517 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 HIST1H2AGP0C0S8 130 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 EBLN1P0CF75 366 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 HIST1H2ADP20671 130 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 IL12AP29459 219 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 SOX9P48436 509 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 CNTN1Q12860 1018 aa16.63■□□□□ 0.25
SHKBP1-216ENST00000598201 FLOT2Q14254 428 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms