RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CD180Q99467 661 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 NRTNQ99748 197 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 MAP3K3Q99759 626 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 NAT9Q9BTE0 207 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 HGH1Q9BTY7 390 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 TRIT1Q9H3H1 467 aaKnown RBP16.26■□□□□ 0.19
SSBP4-204ENST00000597724 POLG2Q9UHN1 485 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 B3GALT1Q9Y5Z6 326 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 PTPRQQ9UMZ3 2332 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 TLCD2A6NGC4 264 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.25■□□□□ 0.19
SSBP4-204ENST00000597724 NIPSNAP2O75323 286 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 TTC4O95801 387 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 TPBGLP0DKB5 382 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 PKMP14618 531 aaKnown RBP16.25■□□□□ 0.19
SSBP4-204ENST00000597724 NELFEP18615 380 aaKnown RBP16.25■□□□□ 0.19
SSBP4-204ENST00000597724 CD82P27701 267 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 MRPS25P82663 173 aaKnown RBP16.25■□□□□ 0.19
SSBP4-204ENST00000597724 CLN3Q13286 438 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 CTBP1Q13363 440 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 DNTTIP2Q5QJE6 756 aaKnown RBP16.25■□□□□ 0.19
SSBP4-204ENST00000597724 PLEKHS1Q5SXH7 462 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 ANKS6Q68DC2 871 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 ARMC6Q6NXE6 501 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 OTOAQ7RTW8 1153 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 ZNF572Q7Z3I7 529 aaPredicted RBP16.25■□□□□ 0.19
SSBP4-204ENST00000597724 AMIGO1Q86WK6 493 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 ZFAND4Q86XD8 727 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 DTX1Q86Y01 620 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 ADGRF3Q8IZF5 1079 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 UNC5BQ8IZJ1 945 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 CALML6Q8TD86 181 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 LRRC39Q96DD0 335 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 TEFMQ96QE5 360 aaKnown RBP16.25■□□□□ 0.19
SSBP4-204ENST00000597724 ERP44Q9BS26 406 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 APMAPQ9HDC9 416 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 LATS2Q9NRM7 1088 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 ZFYVE26Q68DK2 2539 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 MGAQ8IWI9 3026 aa16.25■□□□□ 0.19
SSBP4-204ENST00000597724 FAM187AA6NFU0 413 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 MATN2O00339 956 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 BTN3A3O00478 584 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 POLR1CO15160 346 aaPredicted RBP16.24■□□□□ 0.19
SSBP4-204ENST00000597724 RAD51CO43502 376 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 LIPCP11150 499 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 ELK3P41970 407 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 SLC1A2P43004 574 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 RPL21P46778 160 aaKnown RBP16.24■□□□□ 0.19
SSBP4-204ENST00000597724 SH3BP2P78314 561 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 C2orf54Q08AI8 447 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 ABRQ12979 859 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 PRKAA1Q13131 559 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 TGIF1Q15583 401 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 HIF1AQ16665 826 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 HSP90AA5PQ58FG0 334 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 SPANXN3Q5MJ09 141 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 CEACAM20Q6UY09 585 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 KCNMB4Q86W47 210 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 CRELD1Q96HD1 420 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 SLC41A2Q96JW4 573 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 CTRCQ99895 268 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 ZPBPQ9BS86 351 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 FAM167BQ9BTA0 163 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 SPRY4Q9C004 299 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 XKR8Q9H6D3 395 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 PLAC1Q9HBJ0 212 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 FBXO6Q9NRD1 293 aaPredicted RBP16.24■□□□□ 0.19
SSBP4-204ENST00000597724 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.24■□□□□ 0.19
SSBP4-204ENST00000597724 GALPQ9UBC7 116 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 FBXO5Q9UKT4 447 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 POMT2Q9UKY4 750 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 ICKQ9UPZ9 632 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 TDRKHQ9Y2W6 561 aaKnown RBP16.24■□□□□ 0.19
SSBP4-204ENST00000597724 SNX24Q9Y343 169 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 TEX264Q9Y6I9 313 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 SDK2Q58EX2 2172 aa16.24■□□□□ 0.19
SSBP4-204ENST00000597724 BTN3A1O00481 513 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 NDC80O14777 642 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 HAUS5O94927 633 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 F7P08709 466 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-204ENST00000597724 CHRM3P20309 590 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 KPNA2P52292 529 aaKnown RBP16.23■□□□□ 0.19
SSBP4-204ENST00000597724 ARL4CP56559 192 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 FOXM1Q08050 763 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 CBLBQ13191 982 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 GBX1Q14549 363 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 HP1BP3Q5SSJ5 553 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-204ENST00000597724 BROXQ5VW32 411 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 ZNF549Q6P9A3 640 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 UNC5DQ6UXZ4 953 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 KMT5CQ86Y97 462 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 CARFQ8N187 725 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 GSDMBQ8TAX9 411 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 OR6C1Q96RD1 312 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 IARS2Q9NSE4 1012 aaKnown RBP16.23■□□□□ 0.19
SSBP4-204ENST00000597724 CDC23Q9UJX2 597 aa16.23■□□□□ 0.19
SSBP4-204ENST00000597724 E5RI56 91 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 STMND1H3BQB6 276 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 KDM1AO60341 852 aa16.22■□□□□ 0.19
SSBP4-204ENST00000597724 RPN2P04844 631 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms