RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 MAPK15Q8TD08 544 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 ACMSDQ8TDX5 336 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 ELMO1Q92556 727 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 PANX3Q96QZ0 392 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 INSM2Q96T92 566 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 SLC30A3Q99726 388 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 CCDC3Q9BQI4 270 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 COG4Q9H9E3 785 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 POPDC3Q9HBV1 291 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 SARS2Q9NP81 518 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 LATS2Q9NRM7 1088 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 NCKIPSDQ9NZQ3 722 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 SENP1Q9P0U3 644 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 CPNE7Q9UBL6 633 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 DHRS7Q9Y394 339 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 PCDHGA1Q9Y5H4 931 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 A0A096LPK6 155 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 MED19A0JLT2 244 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 GOLGA8RI6L899 631 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 NUDT21O43809 227 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 WISP3O95389 354 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 MPOP05164 745 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 C2P06681 752 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 XRCC1P18887 633 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 KRT4P19013 534 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 SPINK2P20155 84 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 AOAHP28039 575 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 OR1D5P58170 312 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 MAGOHP61326 146 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 CCL7P80098 99 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 FOXC1Q12948 553 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 PDAP1Q13442 181 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 RPE65Q16518 533 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 AGAP9Q5VTM2 703 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 UGT3A1Q6NUS8 523 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 DUS1LQ6P1R4 473 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 PAQR3Q6TCH7 311 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 WASH2PQ6VEQ5 465 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 RAPH1Q70E73 1250 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 SIDT2Q8NBJ9 832 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 GIMAP7Q8NHV1 300 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 CD200R1Q8TD46 325 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 ADAMTS14Q8WXS8 1223 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 TSSK1BQ9BXA7 367 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 MED4Q9NPJ6 270 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 WASH6PQ9NQA3 447 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 KLHL42Q9P2K6 505 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 TRMT6Q9UJA5 497 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 TLK1Q9UKI8 766 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 ACTL7BQ9Y614 415 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 MDC1Q14676 2089 aaKnown RBP14.63□□□□□ -0.07
TRIM28-207ENST00000597136 A0A1W2PQM1 296 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 RHPN2P1A8MT19 583 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 HMGB1P1B2RPK0 211 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-207ENST00000597136 HYAL3O43820 417 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-207ENST00000597136 CREB1P16220 341 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 ALDH4A1P30038 563 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 GMPRP36959 345 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 CCNFP41002 786 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 FASLGP48023 281 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 UBE2IP63279 158 aaKnown RBP14.63□□□□□ -0.07
TRIM28-207ENST00000597136 INSM1Q01101 510 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-207ENST00000597136 HHEXQ03014 270 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 SLC18A2Q05940 514 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 GPS2Q13227 327 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 BOP1Q14137 746 aaKnown RBP14.63□□□□□ -0.07
TRIM28-207ENST00000597136 HSP90B2PQ58FF3 399 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 TMEM207Q6UWW9 146 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 OTOAQ7RTW8 1153 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 CCDC91Q7Z6B0 441 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 RAB44Q7Z6P3 723 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-207ENST00000597136 VRK3Q8IV63 474 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 C4orf33Q8N1A6 199 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 ZBTB2Q8N680 514 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 PHC3Q8NDX5 983 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 INPP5DQ92835 1189 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 NAT6Q93015 286 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 RMDN2Q96LZ7 410 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 OR52A5Q9H2C5 316 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 GPAMQ9HCL2 828 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 ACSL5Q9ULC5 683 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 WASF3Q9UPY6 502 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 CDYLQ9Y232 598 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 ACOT9Q9Y305 439 aa14.63□□□□□ -0.07
TRIM28-207ENST00000597136 ASPMQ8IZT6 3477 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 KIR2DS5A0A0G2JLQ3 304 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 A0A0G2JNG1 304 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 SLC5A10A0PJK1 596 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 FAM149AA5PLN7 773 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 OR5K4A6NMS3 321 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 KIR2DS3K7RE56 304 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 KPNA5O15131 536 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 GP1BAP07359 652 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 ADRB1P08588 477 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 GSTM1P09488 218 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 GSTM4Q03013 218 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 ILKQ13418 452 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 KIR2DS5Q14953 304 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 TAF1BQ53T94 588 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms