RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CUEDC1Q9NWM3 386 aaPredicted RBP10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 GPN3Q9UHW5 284 aaPredicted RBP10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 PADI2Q9Y2J8 665 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 AGAP14A8MT82 685 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 AKR1B15C9JRZ8 316 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 CCL22O00626 93 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 KCNN4O15554 427 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 STK10O94804 968 aaKnown RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 DDAH2O95865 285 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 PDHA2P29803 388 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 MC4RP32245 332 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 ADRA1AP35348 466 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 CD151P48509 253 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 CDKN1CP49918 316 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 OTUD4Q01804 1114 aaKnown RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 SPARCL1Q14515 664 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 SSPNQ14714 243 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 ZNF789Q5FWF6 425 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 DARS2Q6PI48 645 aaKnown RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 TAS2R42Q7RTR8 314 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 CNGA4Q8IV77 575 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 CDKL3Q8IVW4 592 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 Q8NA96 180 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 GLIS1Q8NBF1 620 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 ACTL9Q8TC94 416 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 TFGQ92734 400 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 KRT35Q92764 455 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 FER1L6-AS2Q96M78 137 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 SMAD5Q99717 465 aaKnown RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 TBL1YQ9BQ87 522 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 DPH2Q9BQC3 489 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 HGH1Q9BTY7 390 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 DHRS4Q9BTZ2 278 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 OR52A5Q9H2C5 316 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 TFB2MQ9H5Q4 396 aaKnown RBP10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 IRAK4Q9NWZ3 460 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 ZDHHC3Q9NYG2 299 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 ACTR10Q9NZ32 417 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 C5AR2Q9P296 337 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 CREBBPQ92793 2442 aa10.23□□□□□ -0.77
CHMP2A-202ENST00000596708 MYO7BQ6PIF6 2116 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 PEX12O00623 359 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 KRT86O43790 486 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 MSL3P1P0C860 447 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 RNF224P0DH78 156 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 CBSLP0DN79 551 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 RBP3P10745 1247 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 CBSP35520 551 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 FOLR3P41439 243 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 ZNF140P52738 457 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 HADHBP55084 474 aaKnown RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 EIF3EP60228 445 aaKnown RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 COPS2P61201 443 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 MSLNQ13421 630 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 PLEKHN1Q494U1 663 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 GPR33Q49SQ1 333 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 C1orf189Q5VU69 101 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 SPESP1Q6UW49 350 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 CDHR3Q6ZTQ4 885 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 SERPINA9Q86WD7 417 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 ADGRF3Q8IZF5 1079 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 IQCKQ8N0W5 287 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 CISD2Q8N5K1 135 aaKnown RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 CCDC110Q8TBZ0 833 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.22□□□□□ -0.772e-6■■■■■ 27.5
CHMP2A-202ENST00000596708 C19orf60Q96EN9 201 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 DNAJC1Q96KC8 554 aaKnown RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 IP6K3Q96PC2 410 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 FAM118BQ9BPY3 351 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 C17orf62Q9BQA9 187 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 PITPNM3Q9BZ71 974 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 SPRTNQ9H040 489 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 NDOR1Q9UHB4 597 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 TFR2Q9UP52 801 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 TDRKHQ9Y2W6 561 aaKnown RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 PTRH2Q9Y3E5 179 aaKnown RBP10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 AP1M2Q9Y6Q5 423 aa10.22□□□□□ -0.77
CHMP2A-202ENST00000596708 HEATR5BQ9P2D3 2071 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 KLHL41O60662 606 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 OR2B3O76000 313 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 CD63P08962 238 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 PRSS56P0CW18 603 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 TPH1P17752 444 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 ACRV1P26436 265 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 CETN2P41208 172 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 NAP1L1P55209 391 aaKnown RBP10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 RPA4Q13156 261 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 BOP1Q14137 746 aaKnown RBP10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 ELOAQ14241 798 aaKnown RBP10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 BRD3Q15059 726 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 NR6A1Q15406 480 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 DEFB110Q30KQ9 67 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 VWA5B1Q5TIE3 1220 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 LYPLAL1Q5VWZ2 237 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 ZNF385CQ66K41 422 aaPredicted RBP10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 C11orf63Q6NUN7 778 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 MICALCLQ6ZW33 695 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 TRIM73Q86UV7 250 aa10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 C19orf47Q8N9M1 422 aaKnown RBP10.21□□□□□ -0.77
CHMP2A-202ENST00000596708 CLEC1AQ8NC01 280 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms