RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SPA17Q15506 151 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 AGAP7PQ5VUJ5 663 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 GFRALQ6UXV0 394 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 LINC00696Q6ZRV3 163 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 TMTC1Q8IUR5 882 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 BCORP1Q8N888 145 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 RASGEF1AQ8N9B8 481 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 OR2Y1Q8NGV0 311 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 NAT14Q8WUY8 206 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 PTERQ96BW5 349 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 MAGEB10Q96LZ2 347 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 C12orf66Q96MD2 445 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 AGAP4Q96P64 663 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 TAAR6Q96RI8 345 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 ANP32EQ9BTT0 268 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 SPRTNQ9H040 489 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 WWP1Q9H0M0 922 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 SLC6A20Q9NP91 592 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 LUC7LQ9NQ29 371 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 C1GALT1Q9NS00 363 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 DDX56Q9NY93 547 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 IFT80Q9P2H3 777 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 FBXL4Q9UKA2 621 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 POMT2Q9UKY4 750 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 CCDC66A2RUB6 948 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 GSAPA4D1B5 854 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 OR2AG2A6NM03 316 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 AGPSO00116 658 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 APOL1O14791 398 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 AURKAO14965 403 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 GPR39O43194 453 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 PSTPIP1O43586 416 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 HCRTR1O43613 425 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 UGT1A9O60656 530 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 UGT1A6P19224 532 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 CAPN3P20807 821 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 UGT1A1P22309 533 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 UGT1A4P22310 534 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 PRDX3P30048 256 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 CDC25BP30305 580 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 DMPKQ09013 629 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 GTF2H3Q13889 308 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 PRKD1Q15139 912 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 TLR1Q15399 786 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 PRAMEF13Q5VWM6 474 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 B3GNTL1Q67FW5 361 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 PDPK2PQ6A1A2 396 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 C11orf63Q6NUN7 778 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 TMEM220Q6QAJ8 160 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 MFSD7Q6UXD7 560 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 RAD9BQ6WBX8 426 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 CDHR3Q6ZTQ4 885 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 CARFQ8N187 725 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 OR1N1Q8NGS0 311 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 TTC25Q96NG3 672 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 OLFM3Q96PB7 478 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 ADGRE3Q9BY15 652 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 GPR63Q9BZJ6 419 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 UGT1A7Q9HAW7 530 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 UGT1A10Q9HAW8 530 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 UGT1A8Q9HAW9 530 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 DHCR7Q9UBM7 475 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 FAM8A1Q9UBU6 413 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 AMACRQ9UHK6 382 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 ZNF711Q9Y462 761 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 HEY1Q9Y5J3 304 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 ALG6Q9Y672 507 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 EPN1Q9Y6I3 576 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 DOCK10Q96BY6 2186 aa13.29□□□□□ -0.28
SHKBP1-208ENST00000595726 WISP2O76076 250 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 KLHL18O94889 574 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 HLA-DPA1P20036 260 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 TLE4Q04727 773 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 PPIDQ08752 370 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 Q0VFX4 171 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 ZBTB17Q13105 803 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 TAZQ16635 292 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 ODF2Q5BJF6 829 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 METRNLQ641Q3 311 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 TMEM207Q6UWW9 146 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 RFX6Q8HWS3 928 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 TMEM139Q8IV31 216 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 BEND7Q8N7W2 519 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 CCNYQ8ND76 341 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 VPS35Q96QK1 796 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 MAK16Q9BXY0 300 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 KIR3DX1Q9H7L2 352 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 SYTL2Q9HCH5 934 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 FAM60AQ9NP50 221 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 NDOR1Q9UHB4 597 aa13.28□□□□□ -0.28
SHKBP1-208ENST00000595726 KCNK1O00180 336 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 BTN3A3O00478 584 aa13.27□□□□□ -0.29
SHKBP1-208ENST00000595726 KCNJ13O60928 360 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms