RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 PALM2Q8IXS6 379 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 CEP112Q8N8E3 955 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 OR52E1Q8NGJ3 308 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 PYROXD1Q8WU10 500 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 JPH3Q8WXH2 748 aaPredicted RBP14.62□□□□□ -0.07
UPF1-202ENST00000594243 B3GNT4Q9C0J1 378 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 ASCL3Q9NQ33 180 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 KLHL42Q9P2K6 505 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 PISDQ9UG56 409 aa14.62□□□□□ -0.07
UPF1-202ENST00000594243 GOLGA4Q13439 2230 aaKnown RBP14.61□□□□□ -0.07
UPF1-202ENST00000594243 OR6C74A6NCV1 312 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 CDRT15L2A8MXV6 281 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 AGRPO00253 132 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 TAF4O00268 1085 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 RASSF9O75901 435 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 ITIH1P19827 911 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 MAPK10P53779 464 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 GFERP55789 205 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 MPP1Q00013 466 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 SLC7A5Q01650 507 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 TTLL9Q3SXZ7 439 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 GLE1Q53GS7 698 aaKnown RBP14.61□□□□□ -0.07
UPF1-202ENST00000594243 TEDDM1Q5T9Z0 273 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 CACHD1Q5VU97 1274 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 FAM92BQ6ZTR7 304 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 GALNT7Q86SF2 657 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 CLEC14AQ86T13 490 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 AMIGO1Q86WK6 493 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 ZBTB2Q8N680 514 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 OR5AR1Q8NGP9 310 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 SKA2Q8WVK7 121 aaPredicted RBP14.61□□□□□ -0.07
UPF1-202ENST00000594243 UBXN4Q92575 508 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 KCNJ9Q92806 393 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 FOPNLQ96NB1 174 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 TAAR9Q96RI9 348 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 CD180Q99467 661 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 WDR83Q9BRX9 315 aaKnown RBP14.61□□□□□ -0.07
UPF1-202ENST00000594243 HGH1Q9BTY7 390 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 PHACTR1Q9C0D0 580 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 TDRKHQ9Y2W6 561 aaKnown RBP14.61□□□□□ -0.07
UPF1-202ENST00000594243 PCDHGA7Q9Y5G6 932 aa14.61□□□□□ -0.07
UPF1-202ENST00000594243 ASPMQ8IZT6 3477 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 ZFHX4Q86UP3 3567 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 PMS2P1A4D2B8 440 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 EFCAB7A8K855 629 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 B4E171 279 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 NVLO15381 856 aaKnown RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 RRP8O43159 456 aaKnown RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 AHSGP02765 367 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 FGF3P11487 239 aaPredicted RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 CCL4P13236 92 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 ATP5DP30049 168 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 SHMT2P34897 504 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 TSPAN7P41732 249 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 PCBP4P57723 403 aaKnown RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 DNTTIP2Q5QJE6 756 aaKnown RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 UGT3A1Q6NUS8 523 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 ZNF549Q6P9A3 640 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 CNSTQ6PJW8 725 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 PRSS42Q7Z5A4 293 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 FAM129CQ86XR2 697 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 CARFQ8N187 725 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 ZNF248Q8NDW4 579 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 CFAP61Q8NHU2 1237 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 SNIP1Q8TAD8 396 aaKnown RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 FBXO25Q8TCJ0 367 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 MAGEC3Q8TD91 643 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 KLHL6Q8WZ60 621 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 USP7Q93009 1102 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 AARSD1Q9BTE6 412 aaKnown RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 ZNF768Q9H5H4 540 aaKnown RBP14.6□□□□□ -0.07
UPF1-202ENST00000594243 PLAC1Q9HBJ0 212 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 SAYSD1Q9NPB0 183 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 OCIAD1Q9NX40 245 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 MOCS1Q9NZB8 636 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 ZFATQ9P243 1243 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 SEMA5BQ9P283 1151 aa14.6□□□□□ -0.07
UPF1-202ENST00000594243 TLCD2A6NGC4 264 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 SRRM3A6NNA2 597 aaPredicted RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 TLX3O43711 291 aaPredicted RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 VPS26AO75436 327 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 POLR2CP19387 275 aaPredicted RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 SLC5A2P31639 672 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 EIF2S3P41091 472 aaKnown RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 ETV5P41161 510 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 SKIV2L2P42285 1042 aaKnown RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 SEPHS1P49903 392 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 CLCN7P51798 805 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 RAB15P59190 212 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 MC2RQ01718 297 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 GUCY2DQ02846 1103 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 MGAT5Q09328 741 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 GBX1Q14549 363 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 FASTKD3Q14CZ7 662 aaKnown RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 DCAF12Q5T6F0 453 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 CYB5D1Q6P9G0 228 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 TRMT10BQ6PF06 316 aaKnown RBP14.59□□□□□ -0.07
UPF1-202ENST00000594243 LRRC69Q6ZNQ3 347 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 KMT5CQ86Y97 462 aa14.59□□□□□ -0.07
UPF1-202ENST00000594243 DCUN1D3Q8IWE4 304 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms