RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ANKS6Q68DC2 871 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 KCNMB4Q86W47 210 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 AMIGO1Q86WK6 493 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ZFAND4Q86XD8 727 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 CILP2Q8IUL8 1156 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 RASGRP3Q8IV61 690 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 SPACA3Q8IXA5 215 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 OR52E1Q8NGJ3 308 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 OR5AR1Q8NGP9 310 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 FAM136AQ96C01 138 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 CFAP36Q96G28 342 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ELMO2Q96JJ3 720 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 TEFMQ96QE5 360 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 CD180Q99467 661 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 EBNA1BP2Q99848 306 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 TRIM56Q9BRZ2 755 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ZPBPQ9BS86 351 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 B3GNT4Q9C0J1 378 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 RAB33BQ9H082 229 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 P2RY12Q9H244 342 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 DPH5Q9H2P9 285 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 XKR8Q9H6D3 395 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 PDE7BQ9NP56 450 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 FBXO6Q9NRD1 293 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 IARS2Q9NSE4 1012 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 INTS10Q9NVR2 710 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 SOHLH2Q9NX45 425 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 ZC3H7BQ9UGR2 993 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 SLC39A10Q9ULF5 831 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 UTP11Q9Y3A2 253 aaKnown RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 MRFAP1Q9Y605 127 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 FAM169AQ9Y6X4 670 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 PTPRQQ9UMZ3 2332 aa9.8□□□□□ -0.84
BRCA1-227ENST00000591849 MN1Q10571 1320 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-227ENST00000591849 PIPSLA2A3N6 862 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 TLCD2A6NGC4 264 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 C2orf74A8MZ97 194 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 C9orf172C9J069 976 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 BHMG1C9JSJ3 638 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-227ENST00000591849 STMND1H3BQB6 276 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 BANF1O75531 89 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 S1PR4O95977 384 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 ANKRD34CP0C6C1 535 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 AOAHP28039 575 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 SHMT2P34897 504 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 MAGEA3P43357 314 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 CARSP49589 748 aaKnown RBP9.79□□□□□ -0.84
BRCA1-227ENST00000591849 CRYMQ14894 314 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 TYSND1Q2T9J0 566 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 TTLL9Q3SXZ7 439 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 ZNF658BQ4V348 819 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-227ENST00000591849 MANEAQ5SRI9 462 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 PLEKHS1Q5SXH7 462 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 HIBCHQ6NVY1 386 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-227ENST00000591849 PRSS42Q7Z5A4 293 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 SLC22A15Q8IZD6 547 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 RAB42Q8N4Z0 105 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 IL22RA1Q8N6P7 574 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 LKAAEAR1Q8TD35 194 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 MAGEC3Q8TD91 643 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 LPGAT1Q92604 370 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 OR6C1Q96RD1 312 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 MAP3K3Q99759 626 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 DDA1Q9BW61 102 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 ZNF768Q9H5H4 540 aaKnown RBP9.79□□□□□ -0.84
BRCA1-227ENST00000591849 TFB2MQ9H5Q4 396 aaKnown RBP9.79□□□□□ -0.84
BRCA1-227ENST00000591849 FBXO8Q9NRD0 319 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 FOXJ2Q9P0K8 574 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 CDC23Q9UJX2 597 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 FBXO5Q9UKT4 447 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 CHMP2BQ9UQN3 213 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 PCDHGA3Q9Y5H0 932 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 B3GALT1Q9Y5Z6 326 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 SCN8AQ9UQD0 1980 aa9.79□□□□□ -0.84
BRCA1-227ENST00000591849 GCN1Q92616 2671 aaKnown RBP9.79□□□□□ -0.84
BRCA1-227ENST00000591849 ZCWPW2A0A1B0GU75 182 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ISM1B1AKI9 464 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 KIF2AO00139 706 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 FANCGO15287 622 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 RAD51CO43502 376 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 NIPSNAP2O75323 286 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 GPC4O75487 556 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 SEC31AO94979 1220 aaKnown RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 TUBB4AP04350 444 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ERVK-10P10266 1014 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 LIPCP11150 499 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 NELFEP18615 380 aaKnown RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 IVDP26440 423 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ACADLP28330 430 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 PRDX3P30048 256 aaKnown RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ELK3P41970 407 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 SLC1A2P43004 574 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 RPL21P46778 160 aaKnown RBP9.78□□□□□ -0.84
BRCA1-227ENST00000591849 TMPRSS3P57727 454 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 PPP1CAP62136 330 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 CXADRP78310 365 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 HSD11B2P80365 405 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 ACY1Q03154 408 aa9.78□□□□□ -0.84
BRCA1-227ENST00000591849 TLE3Q04726 772 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms