RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TMEM164Q5U3C3 297 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 HIBCHQ6NVY1 386 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-212ENST00000590260 ZNF549Q6P9A3 640 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 HOOK3Q86VS8 718 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 TBC1D21Q8IYX1 336 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 OR5K2Q8NHB8 316 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 LCN9Q8WX39 176 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 OR6C1Q96RD1 312 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 SLC30A3Q99726 388 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 SAMD15Q9P1V8 674 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 PLAGL1Q9UM63 463 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 ASF1AQ9Y294 204 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 CRYL1Q9Y2S2 319 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 TMEM184BQ9Y519 407 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-212ENST00000590260 FAM169AQ9Y6X4 670 aa17.69■□□□□ 0.42
DDX39A-212ENST00000590260 KRT87PA6NCN2 255 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 STMND1H3BQB6 276 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 CCDC188H7C350 402 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 K7ENP7 123 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 EBLN1P0CF75 366 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 FGF5P12034 268 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 PPARGP37231 505 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 ADARP55265 1226 aaKnown RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 TMPRSS3P57727 454 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 CTBP1Q13363 440 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 KRT33BQ14525 404 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 ARHGAP40Q5TG30 622 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 PTRHD1Q6GMV3 140 aaKnown RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 MRNIPQ6NTE8 343 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 KLHL35Q6PF15 583 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 INO80CQ6PI98 192 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 UNC5AQ6ZN44 842 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 AMIGO1Q86WK6 493 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 LRRC6Q86X45 466 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 D2HGDHQ8N465 521 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 OTUD6BQ8N6M0 293 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 UBXN4Q92575 508 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 FAM136AQ96C01 138 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 STAMBPL1Q96FJ0 436 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 CCNL2Q96S94 520 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 TCF12Q99081 682 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 KRT12Q99456 494 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 CD180Q99467 661 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 ASPSCR1Q9BZE9 553 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 SRMSQ9H3Y6 488 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 FBXO6Q9NRD1 293 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 SPHK1Q9NYA1 384 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 CIDEBQ9UHD4 219 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 GNPTGQ9UJJ9 305 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 RUVBL2Q9Y230 463 aaKnown RBP17.68■□□□□ 0.42
DDX39A-212ENST00000590260 NFS1Q9Y697 457 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 MAD1L1Q9Y6D9 718 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 IGSF10Q6WRI0 2623 aa17.68■□□□□ 0.42
DDX39A-212ENST00000590260 POLR1CO15160 346 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 SEC31AO94979 1220 aaKnown RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 PRDX3P30048 256 aaKnown RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 SLC1A2P43004 574 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 PLOD1Q02809 727 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 FOXM1Q08050 763 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 ABRQ12979 859 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 CRYMQ14894 314 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 CCSMST1Q4G0I0 132 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 ZNF470Q6ECI4 717 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 CEACAM20Q6UY09 585 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 SYDE1Q6ZW31 735 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 LINC01555Q8NAE3 123 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 GIMAP7Q8NHV1 300 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 ASZ1Q8WWH4 475 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 TEFMQ96QE5 360 aaKnown RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 EBNA1BP2Q99848 306 aaKnown RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 PITPNM3Q9BZ71 974 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 TRIT1Q9H3H1 467 aaKnown RBP17.67■□□□□ 0.42
DDX39A-212ENST00000590260 LATS2Q9NRM7 1088 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 RNF14Q9UBS8 474 aa17.67■□□□□ 0.42
DDX39A-212ENST00000590260 SLC9B1P1A6NJY1 282 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 RAD1O60671 282 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 STK17BO94768 372 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 PVRP15151 417 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 ST6GAL1P15907 406 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 PGAM1P18669 254 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 PAMP19021 973 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 RPL21P46778 160 aaKnown RBP17.66■□□□□ 0.42
DDX39A-212ENST00000590260 ITGA8P53708 1063 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 MPP1Q00013 466 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 TIAL1Q01085 375 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX39A-212ENST00000590260 VAC14Q08AM6 782 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 MORF4L2Q15014 288 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 LONRF1Q17RB8 773 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 SOWAHCQ53LP3 525 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-212ENST00000590260 HP1BP3Q5SSJ5 553 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-212ENST00000590260 BROXQ5VW32 411 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 ZNF449Q6P9G9 518 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 GPR155Q7Z3F1 870 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 SDCCAG8Q86SQ7 713 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-212ENST00000590260 SPATA4Q8NEY3 305 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 ELMO2Q96JJ3 720 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 OR2A14Q96R47 310 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 TRIM31Q9BZY9 425 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms