RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 LDB2O43679 373 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 ZRANB2O95218 330 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC43-204ENST00000588687 CBX6O95503 412 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 TPM3P06753 285 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 CTSBP07858 339 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 CD151P48509 253 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 CDKN1CP49918 316 aaPredicted RBP17.82■□□□□ 0.44
CCDC43-204ENST00000588687 PLEKHN1Q494U1 663 aaPredicted RBP17.82■□□□□ 0.44
CCDC43-204ENST00000588687 ZNF787Q6DD87 383 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 SPESP1Q6UW49 350 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 AMIGO1Q86WK6 493 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 RAB43Q86YS6 212 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 C19orf47Q8N9M1 422 aaKnown RBP17.82■□□□□ 0.44
CCDC43-204ENST00000588687 DCUN1D1Q96GG9 259 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 GBP5Q96PP8 586 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 FERD3LQ96RJ6 166 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 HGH1Q9BTY7 390 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 FAM96AQ9H5X1 160 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 XKR8Q9H6D3 395 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 MVB12BQ9H7P6 319 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 ACTR10Q9NZ32 417 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 ANKRD12Q6UB98 2062 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 C2orf74A8MZ97 194 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 C9J4A7 227 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 PRSS56P0CW18 603 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 TPBGLP0DKB5 382 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 CBSLP0DN79 551 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 RALBP11234 206 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 ITGALP20701 1170 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 VARSP26640 1264 aaKnown RBP17.81■□□□□ 0.44
CCDC43-204ENST00000588687 COL8A1P27658 744 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 CBSP35520 551 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 HADHAP40939 763 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 FOXL2P58012 376 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 KRT33BQ14525 404 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 NR6A1Q15406 480 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 DEFB110Q30KQ9 67 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 ITPRIPL1Q6GPH6 555 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 RHBDD2Q6NTF9 364 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 C11orf63Q6NUN7 778 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 SARM1Q6SZW1 724 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 IGFL3Q6UXB1 125 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 MAMDC2Q7Z304 686 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-204ENST00000588687 TRIM73Q86UV7 250 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 RCOR2Q8IZ40 523 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 PHC3Q8NDX5 983 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 PRR7Q8TB68 274 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 RBM41Q96IZ5 413 aaKnown RBP17.81■□□□□ 0.44
CCDC43-204ENST00000588687 RANBP9Q96S59 729 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 HEMGNQ9BXL5 484 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 CHRNA10Q9GZZ6 450 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 ARNT2Q9HBZ2 717 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 ASF1BQ9NVP2 202 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 ZDHHC3Q9NYG2 299 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 SERTAD3Q9UJW9 196 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 G3BP2Q9UN86 482 aaKnown RBP17.81■□□□□ 0.44
CCDC43-204ENST00000588687 B3GNT3Q9Y2A9 372 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 PADI2Q9Y2J8 665 aa17.81■□□□□ 0.44
CCDC43-204ENST00000588687 CSMD2Q7Z408 3487 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 OTOGQ6ZRI0 2925 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 H7C0S8 307 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 CRTAMO95727 393 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 UGT2B7P16662 529 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 ACRV1P26436 265 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 OTX2P32243 289 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 DCTP40126 519 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 TMPRSS15P98073 1019 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 RPA4Q13156 261 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 MYBPC3Q14896 1274 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 DCAF10Q5QP82 559 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 ANKRD20A2Q5SQ80 823 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 ANKRD20A1Q5TYW2 823 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 ANKRD20A3Q5VUR7 823 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 CCDC50Q8IVM0 306 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 IQCKQ8N0W5 287 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 CLDN19Q8N6F1 224 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 ACTL9Q8TC94 416 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 HEXDCQ8WVB3 486 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 SGSM3Q96HU1 749 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 DNAJC1Q96KC8 554 aaKnown RBP17.8■□□□□ 0.44
CCDC43-204ENST00000588687 OR2A14Q96R47 310 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 ZNF552Q9H707 407 aaPredicted RBP17.8■□□□□ 0.44
CCDC43-204ENST00000588687 TFR2Q9UP52 801 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 NTNG1Q9Y2I2 539 aa17.8■□□□□ 0.44
CCDC43-204ENST00000588687 TEP1Q99973 2627 aaKnown RBP17.79■□□□□ 0.44
CCDC43-204ENST00000588687 DOCK10Q96BY6 2186 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 APCP25054 2843 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 CFAP99D6REC4 459 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 H7C0C1 242 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 MASP2O00187 686 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 IFRD1O00458 451 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-204ENST00000588687 PJA2O43164 708 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 HBQ1P09105 142 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 MC4RP32245 332 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 GCGRP47871 477 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 ATP5OP48047 213 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 OTUD4Q01804 1114 aaKnown RBP17.79■□□□□ 0.44
CCDC43-204ENST00000588687 PRKG2Q13237 762 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 GPR33Q49SQ1 333 aa17.79■□□□□ 0.44
CCDC43-204ENST00000588687 MRPL14Q6P1L8 145 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms