RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TCTN3Q6NUS6 607 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 LRRC8BQ6P9F7 803 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 ZNF534Q76KX8 674 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 ZNF572Q7Z3I7 529 aaPredicted RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 PPIL6Q8IXY8 311 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 FAM26EQ8N5C1 309 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 LILRA3Q8N6C8 439 aaPredicted RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 TEX19Q8NA77 164 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 SPDYE1Q8NFV5 336 aaPredicted RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 UBXN4Q92575 508 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 ZNF514Q96K75 400 aaPredicted RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 RAB33BQ9H082 229 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 WWP1Q9H0M0 922 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 SEMA5BQ9P283 1151 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 FKBPLQ9UIM3 349 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 KCND3Q9UK17 655 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 PADI1Q9ULC6 663 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 TEX15Q9BXT5 2789 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 OR5K3A6NET4 321 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 TLCD2A6NGC4 264 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 EFCAB8A8MWE9 144 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 GP1BBP13224 206 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 IVDP26440 423 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 AKT1P31749 480 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 MAGEA6P43360 314 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 CD97P48960 835 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 ZNF140P52738 457 aaPredicted RBP15.24■□□□□ 0.03
SKA2-209ENST00000583976 PDE1BQ01064 536 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 GPS2Q13227 327 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 TUBB2AQ13885 445 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 FNBP1LQ5T0N5 605 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 RNASEH2BQ5TBB1 312 aaKnown RBP15.24■□□□□ 0.03
SKA2-209ENST00000583976 TMEM220Q6QAJ8 160 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 MAATS1Q7Z4T9 603 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 NAT8LQ8N9F0 302 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 DNAJC1Q96KC8 554 aaKnown RBP15.24■□□□□ 0.03
SKA2-209ENST00000583976 RMDN2Q96LZ7 410 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 TTC25Q96NG3 672 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 NRTNQ99748 197 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 TUBB2BQ9BVA1 445 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 ZCCHC2Q9C0B9 1178 aaKnown RBP15.24■□□□□ 0.03
SKA2-209ENST00000583976 PDE7BQ9NP56 450 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 FGF21Q9NSA1 209 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 BFARQ9NZS9 450 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 MED13Q9UHV7 2174 aa15.24■□□□□ 0.03
SKA2-209ENST00000583976 ICE1Q9Y2F5 2266 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 HEATR9A2RTY3 570 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 ARGFXA6NJG6 315 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 C21orf140B9A014 251 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 AP3B1O00203 1094 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 CCNYL3P0C7X3 344 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 RNF224P0DH78 156 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 ADRA1DP25100 572 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 NPY2RP49146 381 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 NADK2Q4G0N4 442 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 PRR30Q53SZ7 412 aaPredicted RBP15.23■□□□□ 0.03
SKA2-209ENST00000583976 LDLRAP1Q5SW96 308 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 ZDHHC20Q5W0Z9 365 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 PCGF5Q86SE9 256 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 CAND1Q86VP6 1230 aaKnown RBP15.23■□□□□ 0.03
SKA2-209ENST00000583976 APLFQ8IW19 511 aaPredicted RBP15.23■□□□□ 0.03
SKA2-209ENST00000583976 SLC38A9Q8NBW4 561 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 PPHLN1Q8NEY8 458 aaKnown RBP15.23■□□□□ 0.03
SKA2-209ENST00000583976 STYXQ8WUJ0 223 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 C12orf66Q96MD2 445 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 ZNF778Q96MU6 729 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 INSM2Q96T92 566 aaPredicted RBP15.23■□□□□ 0.03
SKA2-209ENST00000583976 DPH5Q9H2P9 285 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 CHRAC1Q9NRG0 131 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 SMOXQ9NWM0 555 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 SYBUQ9NX95 663 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 LUZP4Q9P127 313 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 SLC2A6Q9UGQ3 507 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 SNX24Q9Y343 169 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 TCAF1Q9Y4C2 921 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 SHANK1Q9Y566 2161 aa15.23■□□□□ 0.03
SKA2-209ENST00000583976 FAM187AA6NFU0 413 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 MROH6A6NGR9 719 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 CPNE3O75131 537 aaKnown RBP15.22■□□□□ 0.03
SKA2-209ENST00000583976 SCRG1O75711 98 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 MT-ND3P03897 115 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 GNLYP22749 145 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 HADHAP40939 763 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 KPNA2P52292 529 aaKnown RBP15.22■□□□□ 0.03
SKA2-209ENST00000583976 ACY1Q03154 408 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 ABRQ12979 859 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 UGT8Q16880 541 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 PCID2Q5JVF3 399 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 TSTD2Q5T7W7 516 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 LCN10Q6JVE6 187 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 CASC4Q6P4E1 433 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 CES3Q6UWW8 571 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 ATCAYQ86WG3 371 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 OOSP2Q86WS3 158 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 TMEM126BQ8IUX1 230 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 MPP5Q8N3R9 675 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 MCUQ8NE86 351 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 ZNF398Q8TD17 642 aa15.22■□□□□ 0.03
SKA2-209ENST00000583976 SERPINB12Q96P63 405 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms