RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TXNRD3NB	Q6F5E7	133 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	H3F3C	Q6NXT2	135 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	PAOX	Q6QHF9	649 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF783	Q6ZMS7	281 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	RBM43	Q6ZSC3	357 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	OVCH1	Q7RTY7	1134 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	AOPEP	Q8N6M6	819 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	DQX1	Q8TE96	717 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	IRGQ	Q8WZA9	623 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ANP32B	Q92688	251 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ARHGEF2	Q92974	986 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	COQ10A	Q96MF6	247 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF830	Q96NB3	372 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	RPRD1A	Q96P16	312 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	TWNK	Q96RR1	684 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	CITED1	Q99966	193 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	RBM4B	Q9BQ04	359 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	STRA6	Q9BX79	667 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	KRTAP9-2	Q9BYQ4	174 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	CLSTN2	Q9H4D0	955 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	CNGB3	Q9NQW8	809 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	RIC8B	Q9NVN3	520 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	NECAP2	Q9NVZ3	263 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	SOHLH2	Q9NX45	425 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	NDRG3	Q9UGV2	375 aa		4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	FCF1	Q9Y324	198 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	SRPRB	Q9Y5M8	271 aa	Known RBP	4.67	□□□□□ -1.66
MSI2-216	ENST00000582772	NCKAP5	O14513	1909 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	HSPG2	P98160	4391 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772		A0A0D9SEW6	157 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772		A0A1B0GVC2	190 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	OR5K3	A6NET4	321 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	VSTM2B	A6NLU5	285 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	NPIPA2	E9PIF3	369 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	NPIPA3	F8WFD2	350 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	KIAA0391	O15091	583 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	HS6ST1	O60243	411 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	DLX3	O60479	287 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	CDC40	O60508	579 aa	Known RBP eCLIP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	IGLV3-25	P01717	112 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	RHOC	P08134	193 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	FDPS	P14324	419 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	TPSB2	P20231	275 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	USF1	P22415	310 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	XPA	P23025	273 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	TLX1	P31314	330 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	OPRM1	P35372	400 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	UBA7	P41226	1012 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	GCGR	P47871	477 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	CARS	P49589	748 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	RAB28	P51157	221 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	CCT2	P78371	535 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	TYRO3	Q06418	890 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	ORC2	Q13416	577 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	TPSAB1	Q15661	275 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	CAMK4	Q16566	473 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	NRF1	Q16656	503 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF667	Q5HYK9	610 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	SPINK14	Q6IE38	97 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC25A25	Q6KCM7	469 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF585A	Q6P3V2	769 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	BRAT1	Q6PJG6	821 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	CNST	Q6PJW8	725 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	CLEC2A	Q6UVW9	174 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	LYPD8	Q6UX82	237 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	MEPCE	Q7L2J0	689 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	TRIM48	Q8IWZ4	208 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	GALNT12	Q8IXK2	581 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.66	□□□□□ -1.66	8e-6	■■■■■ 46.4
MSI2-216	ENST00000582772	BEST3	Q8N1M1	668 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	GPD1L	Q8N335	351 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	FAM184A	Q8NB25	1140 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	ZFP62	Q8NB50	900 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	STT3B	Q8TCJ2	826 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	FBF1	Q8TES7	1133 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	SLC20A1	Q8WUM9	679 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	MAML1	Q92585	1016 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	PPP1R14A	Q96A00	147 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	NUS1	Q96E22	293 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	SPATA32	Q96LK8	384 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	CCT8L2	Q96SF2	557 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	PIGQ	Q9BRB3	760 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	MESP1	Q9BRJ9	268 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	REEP2	Q9BRK0	252 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	UTP23	Q9BRU9	249 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	NT5C1A	Q9BXI3	368 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	KCNF1	Q9H3M0	494 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	GOLPH3L	Q9H4A5	285 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	RETREG1	Q9H6L5	497 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	LRRC4	Q9HBW1	653 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	SAMSN1	Q9NSI8	373 aa	Known RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	ZNF226	Q9NYT6	803 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	VPS18	Q9P253	973 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	B4GALT6	Q9UBX8	382 aa		4.66	□□□□□ -1.66
MSI2-216	ENST00000582772	PYCARD	Q9ULZ3	195 aa		4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms