RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	DCD	P81605	110 aa	Known RBP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CACNG1	Q06432	222 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	TUBB8	Q3ZCM7	444 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	PARP15	Q460N3	678 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	OTUD1	Q5VV17	481 aa	Predicted RBP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	SHC4	Q6S5L8	630 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	ABRAXAS1	Q6UWZ7	409 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CEP128	Q6ZU80	1094 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	PAQR7	Q86WK9	346 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	OOSP2	Q86WS3	158 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	FAM131B	Q86XD5	332 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CDC20B	Q86Y33	519 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	P3H2	Q8IVL5	708 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CEP57L1	Q8IYX8	460 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CPSF7	Q8N684	471 aa	Known RBP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CCDC110	Q8TBZ0	833 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	ZFPM2	Q8WW38	1151 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	N4BP2L2	Q92802	583 aa	Predicted RBP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	SNX21	Q969T3	373 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	NT5C3B	Q969T7	300 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	GPR137	Q96N19	417 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	DMRTA2	Q96SC8	542 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	MENT	Q9BUN1	341 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CINP	Q9BW66	212 aa	Predicted RBP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	TLR10	Q9BXR5	811 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	GTPBP4	Q9BZE4	634 aa	Known RBP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	UCK2	Q9BZX2	261 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	KLC2	Q9H0B6	622 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CARD9	Q9H257	536 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	CATSPERB	Q9H7T0	1116 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	LIN7B	Q9HAP6	207 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	HRASLS2	Q9NWW9	162 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	PLA2G3	Q9NZ20	509 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	TRPS1	Q9UHF7	1281 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	SMC3	Q9UQE7	1217 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	ARID1A	O14497	2285 aa		5.78	□□□□□ -1.48
KPNB1-209	ENST00000580158	TLN2	Q9Y4G6	2542 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	TLDC2	A0PJX2	215 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	OR5K3	A6NET4	321 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	TRAFD1	O14545	582 aa	Predicted RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	KLRC4	O43908	158 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	KLK8	O60259	260 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	NUAK1	O60285	661 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	LRIG2	O94898	1065 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	TOX	O94900	526 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	ATE1	O95260	518 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	SOD1	P00441	154 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	CP	P00450	1065 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	CDH3	P22223	829 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	RPL10	P27635	214 aa	Known RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	RENBP	P51606	427 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	AP1S1	P61966	158 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	ALDH6A1	Q02252	535 aa	Known RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	GCNT1	Q02742	428 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	TFF3	Q07654	80 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	PRKAA1	Q13131	559 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	STK38	Q15208	465 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	SPRED3	Q2MJR0	410 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	TDRD12	Q587J7	1177 aa	Known RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	C3P1	Q6ZMU1	363 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	USP45	Q70EL2	814 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	RRAGA	Q7L523	313 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	DOLPP1	Q86YN1	238 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	ZZZ3	Q8IYH5	903 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	C3orf20	Q8ND61	904 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	OR1L3	Q8NH93	324 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	PROKR1	Q8TCW9	393 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	RND1	Q92730	232 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	KAT5	Q92993	513 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	SCAMP4	Q969E2	229 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	MISP3	Q96FF7	219 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	SCRN2	Q96FV2	425 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	SGPP1	Q9BX95	441 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	TXLNG	Q9NUQ3	528 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	BEX4	Q9NWD9	120 aa	Predicted RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	PTGFRN	Q9P2B2	879 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	DNAJC16	Q9Y2G8	782 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	TMA7	Q9Y2S6	64 aa	Known RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	AP1M2	Q9Y6Q5	423 aa		5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	SON	P18583	2426 aa	Known RBP	5.77	□□□□□ -1.49
KPNB1-209	ENST00000580158	SCN2A	Q99250	2005 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	OR52A4P	A6NMU1	304 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	GPR89A	B7ZAQ6	455 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	KMO	O15229	486 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	TTI1	O43156	1089 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	SPRY1	O43609	319 aa	Predicted RBP	5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	VEGFD	O43915	354 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	SOCS5	O75159	536 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	USP1	O94782	785 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	ERBB2	P04626	1255 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	CTSB	P07858	339 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	UMOD	P07911	640 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	MSL3P1	P0C860	447 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	GPR89B	P0CG08	455 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	CBSL	P0DN79	551 aa		5.76	□□□□□ -1.49
KPNB1-209	ENST00000580158	BMP7	P18075	431 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms