RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 PCSK5Q92824 1860 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 WIPF3A6NGB9 483 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 H7C0C1 242 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 APOC4-APOC2K7ER74 178 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 KLF7O75840 302 aaPredicted RBP18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 APOC2P02655 101 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 ATP5OP48047 213 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 ZNF140P52738 457 aaPredicted RBP18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 RPA4Q13156 261 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 MSLNQ13421 630 aaPredicted RBP18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 RAPSNQ13702 412 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 PLEKHN1Q494U1 663 aaPredicted RBP18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 ZNF449Q6P9G9 518 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 MAMDC2Q7Z304 686 aaPredicted RBP18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 MRGPREQ86SM8 312 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 GPR135Q8IZ08 494 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 ADGRF3Q8IZF5 1079 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 SNRNP40Q96DI7 357 aaKnown RBP18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 C19orf60Q96EN9 201 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 APOL2Q9BQE5 337 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 FERMT1Q9BQL6 677 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 FAM96AQ9H5X1 160 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 VPS37BQ9H9H4 285 aa18.59■□□□□ 0.57
CDKN2A-213ENST00000579122 CRYBG3Q68DQ2 2970 aa18.58■□□□□ 0.57
CDKN2A-213ENST00000579122 SPTBP11277 2137 aa18.58■□□□□ 0.57
CDKN2A-213ENST00000579122 HIVEP3Q5T1R4 2406 aa18.58■□□□□ 0.57
CDKN2A-213ENST00000579122 IGLV3-16A0A075B6K0 115 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 KRT86O43790 486 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 KLHL41O60662 606 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 IGHEP01854 428 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 PVRP15151 417 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 OTX2P32243 289 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 OLIG2Q13516 323 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 BOP1Q14137 746 aaKnown RBP18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 PRPSAP1Q14558 356 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 SSPNQ14714 243 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 GPR33Q49SQ1 333 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 SPESP1Q6UW49 350 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 LRRC8AQ8IWT6 810 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 PHC3Q8NDX5 983 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 FER1L6-AS2Q96M78 137 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 NRTNQ99748 197 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 HEMGNQ9BXL5 484 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 KLHL25Q9H0H3 589 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 GOLPH3Q9H4A6 298 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 C10orf88Q9H8K7 445 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 ZDHHC3Q9NYG2 299 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 ACTR10Q9NZ32 417 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 B3GNT3Q9Y2A9 372 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 AP1M2Q9Y6Q5 423 aa18.58■□□□□ 0.56
CDKN2A-213ENST00000579122 CBX6O95503 412 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 LDLRP01130 860 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 ALPPP05187 535 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 CD63P08962 238 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 GSTM1P09488 218 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 PSMB4P28070 264 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 PDHA2P29803 388 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 MARCKSL1P49006 195 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 TMPRSS15P98073 1019 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 GSTM4Q03013 218 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 MYBPC3Q14896 1274 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 NR6A1Q15406 480 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 KYNUQ16719 465 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 ANKRD20A2Q5SQ80 823 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 ANKRD20A1Q5TYW2 823 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 ANKRD20A3Q5VUR7 823 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 IGFL3Q6UXB1 125 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 HOOK3Q86VS8 718 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 C19orf47Q8N9M1 422 aaKnown RBP18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 CLEC1AQ8NC01 280 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 TFGQ92734 400 aaPredicted RBP18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 N4BP2L2Q92802 583 aaPredicted RBP18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 TCTN2Q96GX1 697 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 CHRNA10Q9GZZ6 450 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 XKR8Q9H6D3 395 aa18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 ERRFI1Q9UJM3 462 aaPredicted RBP18.57■□□□□ 0.56
CDKN2A-213ENST00000579122 TRBV5-4A0A0C4DH59 114 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 H3BMH7 237 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 CBSLP0DN79 551 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 MC4RP32245 332 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 CBSP35520 551 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 PRKG2Q13237 762 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 DCAF10Q5QP82 559 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 MLIPQ5VWP3 458 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 LYPLAL1Q5VWZ2 237 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 DENND5AQ6IQ26 1287 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 RHBDD2Q6NTF9 364 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 GALNT16Q8N428 558 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 PROKR1Q8TCW9 393 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 PPP1R2P1Q96PQ5 205 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 BAG1Q99933 345 aaPredicted RBP18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 HGH1Q9BTY7 390 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 ARNT2Q9HBZ2 717 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 FAM60AQ9NP50 221 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 ASF1BQ9NVP2 202 aa18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 GPN3Q9UHW5 284 aaPredicted RBP18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 FEZ2Q9UHY8 353 aaPredicted RBP18.56■□□□□ 0.56
CDKN2A-213ENST00000579122 PTRH2Q9Y3E5 179 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms