RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ERVK-6Q9BXR3 956 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 NSRP1Q9H0G5 558 aaKnown RBP13.11□□□□□ -0.31
SRSF1-202ENST00000578430 MIR1-1HGQ9H1L0 117 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 EPN3Q9H201 632 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
SRSF1-202ENST00000578430 TM7SF3Q9NS93 570 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 ZSCAN32Q9NX65 697 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 FAM8A1Q9UBU6 413 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 SUSD2Q9UGT4 822 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 ADAMTS6Q9UKP5 1117 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 PDE10AQ9Y233 779 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 DNAJC16Q9Y2G8 782 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 NEMP2A6NFY4 417 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 BCAT2O15382 392 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 GNSP15586 552 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 AFF3P51826 1226 aaKnown RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 NAGLUP54802 743 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 GALNT1Q10472 559 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 BST1Q10588 318 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 ILF3Q12906 894 aaKnown RBP eCLIP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 EIF2B5Q13144 721 aaKnown RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 RCN2Q14257 317 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 PCBP2Q15366 365 aaKnown RBP eCLIP13.1□□□□□ -0.318e-10■■□□□ 12.9
SRSF1-202ENST00000578430 TEAD4Q15561 434 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 PHKG1Q16816 387 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 PFKFB4Q16877 469 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 CFAP157Q5JU67 520 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 ZNF678Q5SXM1 525 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 LYSMD4Q5XG99 296 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 CAPRIN2Q6IMN6 1127 aaKnown RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 HID1Q8IV36 788 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 PPP4R1Q8TF05 950 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 UBTD2Q8WUN7 234 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 DLG3Q92796 817 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 EXT2Q93063 718 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 TSACCQ96A04 125 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 PHF21BQ96EK2 531 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 ZC3H10Q96K80 434 aaKnown RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 CCDC138Q96M89 665 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 C7orf26Q96N11 449 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 EGFL8Q99944 293 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 GATA5Q9BWX5 397 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 DRC3Q9H069 523 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 ARL15Q9NXU5 204 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 TSR3Q9UJK0 312 aaKnown RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 PTBP2Q9UKA9 531 aaKnown RBP13.1□□□□□ -0.31
SRSF1-202ENST00000578430 PCOLCE2Q9UKZ9 415 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 HEBP2Q9Y5Z4 205 aa13.1□□□□□ -0.31
SRSF1-202ENST00000578430 CEP192Q8TEP8 1941 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 A0A1B0GTW7 788 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 ARHGEF33A8MVX0 844 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 GFRA3O60609 400 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 EDF1O60869 148 aaKnown RBP13.09□□□□□ -0.31
SRSF1-202ENST00000578430 C1orf105O95561 183 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 WNT1P04628 370 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 HOXD12P35452 270 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 GGT5P36269 586 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 HALP42357 657 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 SLC1A6P48664 564 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 NXPH1P58417 271 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 ABCE1P61221 599 aaKnown RBP13.09□□□□□ -0.31
SRSF1-202ENST00000578430 CTBSQ01459 385 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 OCRLQ01968 901 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 UAP1L1Q3KQV9 507 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 PLK5Q496M5 336 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 ANKS6Q68DC2 871 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 ABRAXAS1Q6UWZ7 409 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 RD3Q7Z3Z2 195 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 DCUN1D3Q8IWE4 304 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 LRRC34Q8IZ02 419 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 PHACTR4Q8IZ21 702 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 SDR16C5Q8N3Y7 309 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 GPBAR1Q8TDU6 330 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 TFGQ92734 400 aaPredicted RBP13.09□□□□□ -0.31
SRSF1-202ENST00000578430 RHBDF1Q96CC6 855 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 FBXL8Q96CD0 374 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 PITPNM3Q9BZ71 974 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 ZDHHC5Q9C0B5 715 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 WWP1Q9H0M0 922 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 OSGEPL1Q9H4B0 414 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 EML4Q9HC35 981 aaKnown RBP13.09□□□□□ -0.31
SRSF1-202ENST00000578430 UTP6Q9NYH9 597 aaKnown RBP13.09□□□□□ -0.31
SRSF1-202ENST00000578430 KCNK6Q9Y257 313 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 STK38LQ9Y2H1 464 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.09□□□□□ -0.31
SRSF1-202ENST00000578430 VPS13AQ96RL7 3174 aa13.09□□□□□ -0.31
SRSF1-202ENST00000578430 MYO1CO00159 1063 aa13.08□□□□□ -0.32
SRSF1-202ENST00000578430 KDM1AO60341 852 aa13.08□□□□□ -0.32
SRSF1-202ENST00000578430 TGDSO95455 350 aa13.08□□□□□ -0.32
SRSF1-202ENST00000578430 FAM107AO95990 144 aa13.08□□□□□ -0.32
SRSF1-202ENST00000578430 CSF2P04141 144 aa13.08□□□□□ -0.32
SRSF1-202ENST00000578430 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
SRSF1-202ENST00000578430 CTSEP14091 401 aa13.08□□□□□ -0.32
SRSF1-202ENST00000578430 SLC2A4P14672 509 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms