RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LRRC23Q53EV4 343 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 RTP2Q5QGT7 225 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SPOUT1Q5T280 376 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLC6A19Q695T7 634 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 UGT3A1Q6NUS8 523 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 IL27RAQ6UWB1 636 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 RSPO2Q6UXX9 243 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 GPRIN3Q6ZVF9 776 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 LPCAT2Q7L5N7 544 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SYVN1Q86TM6 617 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TICAM1Q8IUC6 712 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TMEM126BQ8IUX1 230 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ZNF683Q8IZ20 524 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 OFCC1Q8IZS5 231 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TEX26Q8N6G2 289 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 OR56A4Q8NGH8 313 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 MAGEE2Q8TD90 523 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 EEF1AKMT1Q8WVE0 214 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLCO4A1Q96BD0 722 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TMIGD2Q96BF3 282 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ROPN1LQ96C74 230 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PPM1MQ96MI6 270 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 RNF145Q96MT1 663 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 HOPXQ9BPY8 73 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 RIC8BQ9NVN3 520 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 POLR3BQ9NW08 1133 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 CMTM6Q9NX76 183 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 IKZF3Q9UKT9 509 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 RNF11Q9Y3C5 154 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 LCHNA4D1U4 455 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLC38A8A6NNN8 435 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TBKBP1A7MCY6 615 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 BBIP1A8MTZ0 92 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 FFAR3O14843 346 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 CLOCKO15516 846 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 GPR42O15529 346 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PCDHGA12O60330 932 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLC22A3O75751 556 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PRKD3O94806 890 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 H6PDO95479 791 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PCNAP12004 261 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLC6A2P23975 617 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 NFKBIAP25963 317 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 HOXD9P28356 352 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 CORO1AP31146 461 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLC11A1P49279 550 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 GSK3BP49841 420 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 RHOAP61586 193 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLC14A2Q15849 920 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ZIK1Q3SY52 487 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 UGT3A2Q3SY77 523 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PRAMEF13Q5VWM6 474 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 HMBOX1Q6NT76 420 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PRMT9Q6P2P2 845 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 VPS37AQ8NEZ2 397 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SKA2Q8WVK7 121 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 BTN2A2Q8WVV5 523 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 MAGEH1Q9H213 219 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 NKX2-4Q9H2Z4 354 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ZNF696Q9H7X3 374 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 STARD7Q9NQZ5 370 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PNPLA3Q9NST1 481 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 CGGBP1Q9UFW8 167 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 CD300AQ9UGN4 299 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 AFF4Q9UHB7 1163 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 OAZ3Q9UMX2 235 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PCDHGA9Q9Y5G4 932 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 PCDHGA8Q9Y5G5 932 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PCDHGA6Q9Y5G7 932 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PCDHGA3Q9Y5H0 932 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PCDHGA2Q9Y5H1 932 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 IGLV3-10A0A075B6K4 115 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TCRBV3S1A0A5B6 114 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 DRGXA6NNA5 263 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 VILLO15195 856 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 EPOP01588 193 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 CNPP09543 421 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 BMP4P12644 408 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 OXTRP30559 389 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 MAGEA11P43364 429 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 KPNA1P52294 538 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 SUMO1P63165 101 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 YBX1P67809 324 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 SEMG2Q02383 582 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SREBF2Q12772 1141 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PLD1Q13393 1074 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 MBTPS1Q14703 1052 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 C18orf21Q32NC0 220 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 ATP6AP1LQ52LC2 224 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PAGE3Q5JUK9 113 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 HECTD3Q5T447 861 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ATXN7L2Q5T6C5 722 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 CXorf57Q6NSI4 855 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 CAMK1DQ8IU85 385 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 CLVS1Q8IUQ0 354 aaPredicted RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 PDZD8Q8NEN9 1154 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 MDGA1Q8NFP4 955 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 OR52B6Q8NGF0 335 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 LINC01599Q8WXQ3 324 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 TOP1MTQ969P6 601 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms