RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PRKG2Q13237 762 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 BMPR2Q13873 1038 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 ZNF460Q14592 562 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 TTC23LQ6PF05 361 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 RAPH1Q70E73 1250 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 PIWIL4Q7Z3Z4 852 aaKnown RBP13.62□□□□□ -0.23
RPAIN-217ENST00000575711 SLCO6A1Q86UG4 719 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 CEP97Q8IW35 865 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 DCUN1D3Q8IWE4 304 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 MREGQ8N565 214 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 NKAPQ8N5F7 415 aaKnown RBP13.62□□□□□ -0.23
RPAIN-217ENST00000575711 OR5AR1Q8NGP9 310 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 OR10G6Q8NH81 332 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 WDR48Q8TAF3 677 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 MAGEC3Q8TD91 643 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 DCAKDQ8WVC6 231 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 EEF1AKMT1Q8WVE0 214 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 AHCYL2Q96HN2 611 aaKnown RBP13.62□□□□□ -0.23
RPAIN-217ENST00000575711 DHRS4Q9BTZ2 278 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 TBC1D10AQ9BXI6 508 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 EPB41L1Q9H4G0 881 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 SYNDIG1Q9H7V2 258 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 SLC24A2Q9UI40 661 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 RUVBL2Q9Y230 463 aaKnown RBP13.62□□□□□ -0.23
RPAIN-217ENST00000575711 TDRKHQ9Y2W6 561 aaKnown RBP13.62□□□□□ -0.23
RPAIN-217ENST00000575711 NFS1Q9Y697 457 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 PIEZO1Q92508 2521 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 ARHGEF17Q96PE2 2063 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-217ENST00000575711 IGHV1OR21-1A0A087WYE8 117 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 PHGDHO43175 533 aaKnown RBP13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CTIFO43310 598 aaKnown RBP13.61□□□□□ -0.23
RPAIN-217ENST00000575711 B4GAT1O43505 415 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 DUX1O43812 170 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 KRT37O76014 449 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 MATN4O95460 622 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CATP04040 527 aaKnown RBP13.61□□□□□ -0.23
RPAIN-217ENST00000575711 SHBGP04278 402 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 RPLP0P05388 317 aaKnown RBP13.61□□□□□ -0.23
RPAIN-217ENST00000575711 AMD1P17707 334 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CRABP2P29373 138 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CCNFP41002 786 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 SERPINB8P50452 374 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CCL7P80098 99 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 GPLD1P80108 840 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 ZKSCAN8Q15776 578 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-217ENST00000575711 AMZ1Q400G9 498 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 PPM1JQ5JR12 505 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 ADGRD1Q6QNK2 874 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CYHR1Q6ZMK1 362 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 CMC1Q7Z7K0 106 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 MYRIPQ8NFW9 859 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 LRRN3Q9H3W5 708 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 PSMC3IPQ9P2W1 217 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-217ENST00000575711 DMXL1Q9Y485 3027 aa13.61□□□□□ -0.23
RPAIN-217ENST00000575711 HMX2A2RU54 273 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 ZBTB14O43829 449 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 OPA1O60313 960 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 PSIP1O75475 530 aaKnown RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 UBXN7O94888 489 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 DKK1O94907 266 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 C1orf105O95561 183 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 C8GP07360 202 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 SNRPAP09012 282 aaKnown RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 NUDT17P0C025 328 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 MAP4P27816 1152 aaKnown RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 GCAP28676 217 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 BDKRB1P46663 353 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 IFFO1Q0D2I5 559 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 SP140Q13342 867 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 SPIDRQ14159 915 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 TAF1BQ53T94 588 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 KLHL35Q6PF15 583 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 TMEM207Q6UWW9 146 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 DHRS13Q6UX07 377 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 CCDC91Q7Z6B0 441 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 RAB42Q8N4Z0 105 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 OR52E1Q8NGJ3 308 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 LCN9Q8WX39 176 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 JPH3Q8WXH2 748 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 ASB11Q8WXH4 323 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 RAD51AP1Q96B01 352 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 MTBPQ96DY7 904 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 PDLIM5Q96HC4 596 aaKnown RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 CFAP54Q96N23 3096 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 GFM1Q96RP9 751 aaKnown RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 TFB2MQ9H5Q4 396 aaKnown RBP13.6□□□□□ -0.23
RPAIN-217ENST00000575711 SNX15Q9NRS6 342 aa13.6□□□□□ -0.23
RPAIN-217ENST00000575711 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 A0A1W2PQM1 296 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 FAM221BA6H8Z2 402 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
RPAIN-217ENST00000575711 TRIM49D1C9J1S8 452 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 GFYI3L273 518 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 SLC16A5O15375 505 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 TCEA3O75764 348 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms