RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	KCTD3	Q9Y597	815 aa		12.5	□□□□□ -0.41
TRPV1-208	ENST00000574085	GRXCR2	A6NFK2	248 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	EVPLL	A8MZ36	301 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	CXCR6	O00574	342 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	PIR	O00625	290 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	POLR1C	O15160	346 aa	Predicted RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	SGTA	O43765	313 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	TXN	P10599	105 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	LIPA	P38571	399 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	HTR3A	P46098	478 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	CXCR3	P49682	368 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	AGTR2	P50052	363 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	ZNF45	Q02386	682 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	KDELC1	Q6UW63	502 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	DPP9	Q86TI2	863 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	HIPK1	Q86Z02	1210 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	LURAP1L	Q8IV03	231 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	FBXO16	Q8IX29	292 aa	Predicted RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	GALNT12	Q8IXK2	581 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	BEND7	Q8N7W2	519 aa	Predicted RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	OR8J3	Q8NGG0	315 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	RASSF5	Q8WWW0	418 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	SLC38A4	Q969I6	547 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	PGAP3	Q96FM1	320 aa	Predicted RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	TFB2M	Q9H5Q4	396 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	ERAP1	Q9NZ08	941 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	SNX6	Q9UNH7	406 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	CFL2	Q9Y281	166 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	GMPPB	Q9Y5P6	360 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	CENPX	A8MT69	81 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	FADS2P1	A8MWK0	482 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	C19orf81	C9J6K1	198 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	CAPN1	P07384	714 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	RPS17	P08708	135 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	G6PD	P11413	515 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	AKAP5	P24588	427 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	UGT2B10	P36537	528 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	KCTD2	Q14681	263 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	BRMS1L	Q5PSV4	323 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	AHSA2	Q719I0	299 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	EFL1	Q7Z2Z2	1120 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	CYP4Z1	Q86W10	505 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	LINC01465	Q8N7H1	131 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	OR10Q1	Q8NGQ4	319 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	PPP1R2P1	Q96PQ5	205 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	BARD1	Q99728	777 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	ITPA	Q9BY32	194 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	IKZF5	Q9H5V7	419 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	TRMT13	Q9NUP7	481 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	GIMAP4	Q9NUV9	329 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	VNN3	Q9NY84	501 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	NPAP1	Q9NZP6	1156 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	KLK14	Q9P0G3	267 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	IKZF3	Q9UKT9	509 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	CDH9	Q9ULB4	789 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	UBQLN1	Q9UMX0	589 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	GINS2	Q9Y248	185 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	WBP11	Q9Y2W2	641 aa	Known RBP	12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	PCDHGB6	Q9Y5F9	930 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	MAU2	Q9Y6X3	613 aa		12.49	□□□□□ -0.41
TRPV1-208	ENST00000574085	ARNTL	O00327	626 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	AP3D1	O14617	1153 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	KERA	O60938	352 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	ECI2	O75521	394 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	RECQL4	O94761	1208 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	F9	P00740	461 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	SLC2A3	P11169	496 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	COL6A1	P12109	1028 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	CFL1	P23528	166 aa	Known RBP	12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	GADD45A	P24522	165 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	KRT20	P35900	424 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	TAF6	P49848	677 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	HUNK	P57058	714 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	CXCR4	P61073	352 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	PRKCD	Q05655	676 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	CYP4F3	Q08477	520 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	PON2	Q15165	354 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	PRAMEF18	Q5VWM3	479 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	NXNL2	Q5VZ03	156 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	NEK5	Q6P3R8	708 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	TAC4	Q86UU9	113 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	AMER2	Q8N7J2	671 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	CDYL2	Q8N8U2	506 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	ESAM	Q96AP7	390 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	NXF3	Q9H4D5	531 aa	Known RBP	12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	ACTL8	Q9H568	366 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	CCNB1IP1	Q9NPC3	277 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	PLSCR3	Q9NRY6	295 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	EHD3	Q9NZN3	535 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	ELOVL7	A1L3X0	281 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085		H3BUI4	141 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	DSCR3	O14972	297 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	PAPSS2	O95340	614 aa	Predicted RBP	12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	MED26	O95402	600 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	PGK2	P07205	417 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	MSH3	P20585	1137 aa		12.48	□□□□□ -0.41
TRPV1-208	ENST00000574085	SCNN1G	P51170	649 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms