RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 VPS37BQ9H9H4 285 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 ROPN1Q9HAT0 212 aaPredicted RBP8.87□□□□□ -0.99
NDE1-207ENST00000573203 ANAPC5Q9UJX4 755 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 ADAM21Q9UKJ8 722 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 PCDHGA3Q9Y5H0 932 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 B3GALT1Q9Y5Z6 326 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 CFAP20Q9Y6A4 193 aaKnown RBP8.87□□□□□ -0.99
NDE1-207ENST00000573203 SDK2Q58EX2 2172 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 MGAQ8IWI9 3026 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 LOC400499M0QZD8 3231 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 AHCTF1Q8WYP5 2266 aa8.87□□□□□ -0.99
NDE1-207ENST00000573203 C17orf113A0A1B0GUU1 675 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CCDC162PA2VCL2 907 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 OR51F1A6NGY5 319 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 EIF4E1BA6NMX2 242 aaKnown RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 HMGB1P1B2RPK0 211 aaPredicted RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 K7ENP7 123 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 C9P02748 559 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 ANKRD34CP0C6C1 535 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CCNYL3P0C7X3 344 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CAPZBP47756 277 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 LEPRP48357 1165 aaKnown RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 SEPHS1P49903 392 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 ATP1A2P50993 1020 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 ARSDP51689 593 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 PMS2P54278 862 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 MC2RQ01718 297 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 ITIH4Q14624 930 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 MORF4L2Q15014 288 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 TSTD2Q5T7W7 516 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 AGBL2Q5U5Z8 902 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CACHD1Q5VU97 1274 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 LYPLAL1Q5VWZ2 237 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 ANKS6Q68DC2 871 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 DUS1LQ6P1R4 473 aaKnown RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 KLHL35Q6PF15 583 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 INO80CQ6PI98 192 aaPredicted RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 AFTPHQ6ULP2 937 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CEACAM20Q6UY09 585 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 FAM92BQ6ZTR7 304 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 NLRP9Q7RTR0 991 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 VASH2Q86V25 355 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 HOOK3Q86VS8 718 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 LILRA3Q8N6C8 439 aaPredicted RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 CLDN19Q8N6F1 224 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 BMPERQ8N8U9 685 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 PPHLN1Q8NEY8 458 aaKnown RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 OR13J1Q8NGT2 312 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 HDAC10Q969S8 669 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 RMDN2Q96LZ7 410 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 TEFMQ96QE5 360 aaKnown RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 RANBP9Q96S59 729 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 INSM2Q96T92 566 aaPredicted RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 TTC1Q99614 292 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CTRCQ99895 268 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 TRIM31Q9BZY9 425 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CASS4Q9NQ75 786 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 EIF2B3Q9NR50 452 aaKnown RBP8.86□□□□□ -0.99
NDE1-207ENST00000573203 SLC2A6Q9UGQ3 507 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 ASIC3Q9UHC3 531 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 RIMKLBQ9ULI2 386 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 TCAF1Q9Y4C2 921 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 HEBP2Q9Y5Z4 205 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 COLEC10Q9Y6Z7 277 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 CACNA1GO43497 2377 aa8.86□□□□□ -0.99
NDE1-207ENST00000573203 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 AP3B1O00203 1094 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 QSOX1O00391 747 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 IFRD1O00458 451 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 DNALI1O14645 258 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 POLR1CO15160 346 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 EIF3HO15372 352 aaKnown RBP eCLIP8.85□□□□□ -0.99
NDE1-207ENST00000573203 TOX3O15405 576 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 AP2A2O94973 939 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 GOT2P00505 430 aaKnown RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 FTH1P02794 183 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 GSTM1P09488 218 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 MYZAPP0CAP1 466 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 PSMA3P25788 255 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 NDUFS1P28331 727 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 FOXN2P32314 431 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 PPARGP37231 505 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 NSG1P42857 185 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 SESN2P58004 480 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 PRAMEP78395 509 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 RHDQ02161 417 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 GSTM4Q03013 218 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 FOXM1Q08050 763 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 SRSF6Q13247 344 aaKnown RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 TRIP13Q15645 432 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 SOWAHCQ53LP3 525 aaPredicted RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 CAPRIN2Q6IMN6 1127 aaKnown RBP8.85□□□□□ -0.99
NDE1-207ENST00000573203 ARMC6Q6NXE6 501 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 XKR5Q6UX68 686 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 PRSS42Q7Z5A4 293 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 OOSP2Q86WS3 158 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 DTX1Q86Y01 620 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 IL22RA1Q8N6P7 574 aa8.85□□□□□ -0.99
NDE1-207ENST00000573203 ZSCAN1Q8NBB4 408 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms