RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MGAT4DA6NG13 374 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 ERI2A8K979 691 aaKnown RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 STMND1H3BQB6 276 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 H7C0S8 307 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 TOX3O15405 576 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 LIASO43766 372 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 GAS8O95995 478 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 C9P02748 559 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 POLBP06746 335 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 ATP1B2P14415 290 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 ITGALP20701 1170 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 PBLDP30039 288 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 MC4RP32245 332 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 FDFT1P37268 417 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 LMAN1P49257 510 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 ZNF140P52738 457 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 RAC1P63000 192 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 MC2RQ01718 297 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 SNX1Q13596 522 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 GPR18Q14330 331 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 NFE2L1Q14494 772 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 POU6F1Q14863 301 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 OASLQ15646 514 aaKnown RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 RPE65Q16518 533 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 SKIDA1Q1XH10 827 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 GPR33Q49SQ1 333 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 TAF1BQ53T94 588 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 ZRANB3Q5FWF4 1079 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 MANEAQ5SRI9 462 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 ANKS6Q68DC2 871 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 FAM83HQ6ZRV2 1179 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 TAS2R42Q7RTR8 314 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 CFAP206Q8IYR0 622 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 NXPE1Q8N323 547 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 BMPERQ8N8U9 685 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 DNAAF3Q8N9W5 541 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 OR2L2Q8NH16 312 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 STYXQ8WUJ0 223 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 RTP4Q96DX8 246 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 DNAJC1Q96KC8 554 aaKnown RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 LINC00615Q96LM1 132 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 C9orf72Q96LT7 481 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 ALS2CR12Q96Q35 445 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 TEFMQ96QE5 360 aaKnown RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 COPS8Q99627 209 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 DDA1Q9BW61 102 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 SSBP4Q9BWG4 385 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 SOX17Q9H6I2 414 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 NLE1Q9NVX2 485 aaPredicted RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 RNF112Q9ULX5 631 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 DRG1Q9Y295 367 aaKnown RBP7.27□□□□□ -1.25
NUP88-205ENST00000572809 SCN8AQ9UQD0 1980 aa7.27□□□□□ -1.25
NUP88-205ENST00000572809 PTPRQQ9UMZ3 2332 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 C17orf113A0A1B0GUU1 675 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 E7EVH7 732 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CCL22O00626 93 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 POLR1CO15160 346 aaPredicted RBP7.26□□□□□ -1.25
NUP88-205ENST00000572809 SGTAO43765 313 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 NRDCO43847 1150 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 IFNB1P01574 187 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 ANKRD34CP0C6C1 535 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 ETS1P14921 441 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 SEPHS1P49903 392 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CDKN1CP49918 316 aaPredicted RBP7.26□□□□□ -1.25
NUP88-205ENST00000572809 GFERP55789 205 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 GSTM4Q03013 218 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CACNG1Q06432 222 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CDH17Q12864 832 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 SEPT6Q14141 434 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 KRT33BQ14525 404 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CCNG2Q16589 344 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 BCL7AQ4VC05 210 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 KLHL35Q6PF15 583 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CEACAM20Q6UY09 585 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 PRUNE1Q86TP1 453 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 SERPINA9Q86WD7 417 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 TRIM58Q8NG06 486 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 OR52K1Q8NGK4 314 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 NAT14Q8WUY8 206 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 ZFPM2Q8WW38 1151 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 MAIP1Q8WWC4 291 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 JPH3Q8WXH2 748 aaPredicted RBP7.26□□□□□ -1.25
NUP88-205ENST00000572809 GATAD2BQ8WXI9 593 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 WBP1Q96G27 269 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 ZDHHC12Q96GR4 267 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 C12orf66Q96MD2 445 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 TGM7Q96PF1 710 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CTRCQ99895 268 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 ZPBPQ9BS86 351 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CCM2Q9BSQ5 444 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 SPRY4Q9C004 299 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 RAB33BQ9H082 229 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 WWP1Q9H0M0 922 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 IMP3Q9NV31 184 aaKnown RBP7.26□□□□□ -1.25
NUP88-205ENST00000572809 PIH1D1Q9NWS0 290 aaKnown RBP7.26□□□□□ -1.25
NUP88-205ENST00000572809 EPHA6Q9UF33 1036 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 COLEC10Q9Y6Z7 277 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 CACNA1GO43497 2377 aa7.26□□□□□ -1.25
NUP88-205ENST00000572809 MN1Q10571 1320 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms