RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 SOHLH2Q9NX45 425 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD3-213ENST00000571249 COQ4Q9Y3A0 265 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.68□□□□□ -1.349e-8■■■■□ 20.3
CHD3-213ENST00000571249 VWFP04275 2813 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 ANKRD12Q6UB98 2062 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 DYTNA2CJ06 578 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 LGALS16A8MUM7 142 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 NPIPA5E9PKD4 350 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 KIF2AO00139 706 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 CLDN4O14493 209 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 CCP110O43303 1012 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 ZBTB11O95625 1053 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 FGFR1OPO95684 399 aaKnown RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 CBSLP0DN79 551 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 LHCGRP22888 699 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 RPL13P26373 211 aaKnown RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 CBSP35520 551 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 SLC6A3Q01959 620 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 ADCY2Q08462 1091 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 PTPRRQ15256 657 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 PPP2R5EQ16537 467 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 NFIL3Q16649 462 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 TPD52L1Q16890 204 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 C4orf46Q504U0 113 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 TM4SF20Q53R12 229 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 ZNF789Q5FWF6 425 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 DCAF17Q5H9S7 520 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 FIGNQ5HY92 759 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 TCERG1LQ5VWI1 586 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 ZNF385CQ66K41 422 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 E4F1Q66K89 784 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 ARSKQ6UWY0 536 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 SLC26A9Q7LBE3 791 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 FGD2Q7Z6J4 655 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 FAM131BQ86XD5 332 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 CLYBLQ8N0X4 340 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 PPM1KQ8N3J5 372 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 RPRMLQ8N4K4 120 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 WDTC1Q8N5D0 677 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 SCAMP4Q969E2 229 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 IQCDQ96DY2 449 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 PGAP3Q96FM1 320 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 COX14Q96I36 57 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 GPR137Q96N19 417 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 ERGIC2Q96RQ1 377 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 C17orf62Q9BQA9 187 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 MESP1Q9BRJ9 268 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 NAA15Q9BXJ9 866 aaKnown RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 TLR10Q9BXR5 811 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 NOL6Q9H6R4 1146 aaKnown RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 FANCEQ9HB96 536 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 LRTM1Q9HBL6 345 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 GPATCH2LQ9NWQ4 482 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 UBA2Q9UBT2 640 aaPredicted RBP6.67□□□□□ -1.34
CHD3-213ENST00000571249 STAP1Q9ULZ2 295 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 NPIPA1Q9UND3 350 aa6.67□□□□□ -1.34
CHD3-213ENST00000571249 A0A087X1B8 175 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 C17orf113A0A1B0GUU1 675 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 SLC9B1P1A6NJY1 282 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 OR52A4PA6NMU1 304 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 PDZK1P1A8MUH7 402 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 TMEM150CB9EJG8 249 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 AKR1B15C9JRZ8 316 aaPredicted RBP6.66□□□□□ -1.34
CHD3-213ENST00000571249 FAM72CH0Y354 149 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 PSMD11O00231 422 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 TRAFD1O14545 582 aaPredicted RBP6.66□□□□□ -1.34
CHD3-213ENST00000571249 ZNF749O43361 778 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 MED7O43513 233 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 ERBB2P04626 1255 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CELA3AP09093 270 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 ABOP16442 354 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CHRNB4P30926 498 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 KIR2DL3P43628 341 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CSNK1DP48730 415 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CLCNKAP51800 687 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 MPP2Q14168 576 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 SLC9A5Q14940 896 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 MEA1Q16626 185 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 FAM72AQ5TYM5 149 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 MANEALQ5VSG8 457 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 AGAP9Q5VTM2 703 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 C1orf189Q5VU69 101 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 FAM72DQ6L9T8 149 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 HEPHL1Q6MZM0 1159 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 PPP4R4Q6NUP7 873 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 NAPRTQ6XQN6 538 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 TRIM72Q6ZMU5 477 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 RRAGAQ7L523 313 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 TSPAN33Q86UF1 283 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 FAM72BQ86X60 149 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 TMTC1Q8IUR5 882 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CNGA4Q8IV77 575 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 TRIM42Q8IWZ5 723 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 RBM12BQ8IXT5 1001 aaKnown RBP6.66□□□□□ -1.34
CHD3-213ENST00000571249 RAVER1Q8IY67 606 aaKnown RBP6.66□□□□□ -1.34
CHD3-213ENST00000571249 C17orf53Q8N3J3 647 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms