RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 GLRBP48167 497 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 SOX8P57073 446 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 TAZQ16635 292 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 ASTE1Q2TB18 679 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-204ENST00000570902 CRB2Q5IJ48 1285 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 C1QL3Q5VWW1 255 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 RHBDD2Q6NTF9 364 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 SPOCD1Q6ZMY3 1216 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 Q6ZS92 163 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 ZC3H18Q86VM9 953 aaKnown RBP18.37■□□□□ 0.53
SCARF1-204ENST00000570902 ST6GALNAC3Q8NDV1 305 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 OR52E1Q8NGJ3 308 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 OR2Y1Q8NGV0 311 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.37■□□□□ 0.53
SCARF1-204ENST00000570902 COPS8Q99627 209 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 KLHL25Q9H0H3 589 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 OR52A5Q9H2C5 316 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 COG4Q9H9E3 785 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 P4HTMQ9NXG6 502 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 ACTR10Q9NZ32 417 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 HACD1B0YJ81 288 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 ANXA9O76027 345 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 AGTP01019 485 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 CBSLP0DN79 551 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 SPTBP11277 2137 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 CBSP35520 551 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 GEMP55040 296 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 PER3P56645 1201 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 DCDP81605 110 aaKnown RBP18.36■□□□□ 0.53
SCARF1-204ENST00000570902 TRIM14Q14142 442 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 KAZNQ674X7 775 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 SPESP1Q6UW49 350 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 VSTM4Q8IW00 320 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 NXPE1Q8N323 547 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 C19orf47Q8N9M1 422 aaKnown RBP18.36■□□□□ 0.53
SCARF1-204ENST00000570902 PTERQ96BW5 349 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 QKIQ96PU8 341 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCARF1-204ENST00000570902 AP1M1Q9BXS5 423 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 ATP13A2Q9NQ11 1180 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 IFT80Q9P2H3 777 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-204ENST00000570902 SRPK3Q9UPE1 567 aa18.36■□□□□ 0.53
SCARF1-204ENST00000570902 ABCA12Q86UK0 2595 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 SPOPO43791 374 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 CRTAMO95727 393 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 TPM1P09493 284 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 ITGALP20701 1170 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 XIAPP98170 497 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 RPA4Q13156 261 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 LLGL1Q15334 1064 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 CYP2A13Q16696 494 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 C1orf189Q5VU69 101 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 ADGRF3Q8IZF5 1079 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 OR8K1Q8NGG5 319 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 INPP5DQ92835 1189 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 GBP5Q96PP8 586 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 C19orf43Q9BQ61 176 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 FICDQ9BVA6 458 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 CHRNA10Q9GZZ6 450 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 GBA3Q9H227 469 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 ZNHIT6Q9NWK9 470 aaKnown RBP18.35■□□□□ 0.53
SCARF1-204ENST00000570902 PIKFYVEQ9Y2I7 2098 aa18.35■□□□□ 0.53
SCARF1-204ENST00000570902 H3BMH7 237 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 PSTPIP1O43586 416 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 COMTP21964 271 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 AIMP2Q13155 320 aaKnown RBP18.34■□□□□ 0.53
SCARF1-204ENST00000570902 BOP1Q14137 746 aaKnown RBP18.34■□□□□ 0.53
SCARF1-204ENST00000570902 TFDP3Q5H9I0 405 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 ITPRIPL1Q6GPH6 555 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 SNX20Q7Z614 316 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 CUZD1Q86UP6 607 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 PHC3Q8NDX5 983 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 COG1Q8WTW3 980 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 TFGQ92734 400 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-204ENST00000570902 NACC2Q96BF6 587 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 WDR77Q9BQA1 342 aaPredicted RBP18.34■□□□□ 0.53
SCARF1-204ENST00000570902 HGH1Q9BTY7 390 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 XKR8Q9H6D3 395 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 TXLNGQ9NUQ3 528 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 NTNG1Q9Y2I2 539 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 HYOU1Q9Y4L1 999 aa18.34■□□□□ 0.53
SCARF1-204ENST00000570902 ZSCAN9O15535 394 aaPredicted RBP18.33■□□□□ 0.52
SCARF1-204ENST00000570902 HNRNPRO43390 633 aaKnown RBP18.33■□□□□ 0.52
SCARF1-204ENST00000570902 GSTM1P09488 218 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 ELAVL4P26378 380 aaKnown RBP18.33■□□□□ 0.52
SCARF1-204ENST00000570902 SHMT2P34897 504 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 GSTM4Q03013 218 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 PRKG2Q13237 762 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 GPR33Q49SQ1 333 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 MRPL14Q6P1L8 145 aaKnown RBP18.33■□□□□ 0.52
SCARF1-204ENST00000570902 TLDC1Q6P9B6 456 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 RANBP10Q6VN20 620 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 PPP1R32Q7Z5V6 425 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 SRRM1Q8IYB3 904 aaKnown RBP18.33■□□□□ 0.52
SCARF1-204ENST00000570902 PPP4R1Q8TF05 950 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 DNAJC7Q99615 494 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 FERMT1Q9BQL6 677 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 SPRTNQ9H040 489 aaPredicted RBP18.33■□□□□ 0.52
SCARF1-204ENST00000570902 FAM60AQ9NP50 221 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 ZDHHC3Q9NYG2 299 aa18.33■□□□□ 0.52
SCARF1-204ENST00000570902 CDYLQ9Y232 598 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms