RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 NUP210LQ5VU65 1888 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 SETD2Q9BYW2 2564 aaPredicted RBP14.35□□□□□ -0.11
USB1-214ENST00000568848 A0A1W2PQJ5 194 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 CST8O60676 142 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 KCNJ13O60928 360 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 OR2B3O76000 313 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 SRP72O76094 671 aaKnown RBP14.35□□□□□ -0.11
USB1-214ENST00000568848 SNRPB2P08579 225 aaKnown RBP14.35□□□□□ -0.11
USB1-214ENST00000568848 H2AFZP0C0S5 128 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 TPBGLP0DKB5 382 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 ITGAXP20702 1163 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 ITGA3P26006 1051 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 GABRA4P48169 554 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 MARCKSL1P49006 195 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 ITGA9Q13797 1035 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 BRD3Q15059 726 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 SLC14A2Q15849 920 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 BCL7AQ4VC05 210 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 H2AFVQ71UI9 128 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 PID1Q7Z2X4 250 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 FJX1Q86VR8 437 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 CCDC50Q8IVM0 306 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 CLEC1AQ8NC01 280 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 GRHL3Q8TE85 626 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 TFB1MQ8WVM0 346 aaKnown RBP14.35□□□□□ -0.11
USB1-214ENST00000568848 SYN2Q92777 582 aaPredicted RBP14.35□□□□□ -0.11
USB1-214ENST00000568848 BARD1Q99728 777 aaKnown RBP14.35□□□□□ -0.11
USB1-214ENST00000568848 FAM118BQ9BPY3 351 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 OR52A5Q9H2C5 316 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 TRABDQ9H4I3 376 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 SLC6A20Q9NP91 592 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 C5AR2Q9P296 337 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 UVRAGQ9P2Y5 699 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 SERTAD3Q9UJW9 196 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 ACSL5Q9ULC5 683 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 BZW2Q9Y6E2 419 aaKnown RBP14.35□□□□□ -0.11
USB1-214ENST00000568848 ZFHX3Q15911 3703 aa14.35□□□□□ -0.11
USB1-214ENST00000568848 PCM1Q15154 2024 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 KRT38O76015 456 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 UGT2B7P16662 529 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 AGXTP21549 392 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 CDKN2BP42772 138 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 UBASH3AP57075 661 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 ZNF658BQ4V348 819 aaPredicted RBP14.34□□□□□ -0.11
USB1-214ENST00000568848 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 ZADH2Q8N4Q0 377 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 C2orf73Q8N5S3 287 aaPredicted RBP14.34□□□□□ -0.11
USB1-214ENST00000568848 CLDN19Q8N6F1 224 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 C19orf47Q8N9M1 422 aaKnown RBP14.34□□□□□ -0.11
USB1-214ENST00000568848 CATSPER1Q8NEC5 780 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 OR5AR1Q8NGP9 310 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 IRAK4Q9NWZ3 460 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 IFT80Q9P2H3 777 aaPredicted RBP14.34□□□□□ -0.11
USB1-214ENST00000568848 RSPH14Q9UHP6 348 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 GPN3Q9UHW5 284 aaPredicted RBP14.34□□□□□ -0.11
USB1-214ENST00000568848 CRLS1Q9UJA2 301 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 PADI2Q9Y2J8 665 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 PRSS21Q9Y6M0 314 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 COLEC10Q9Y6Z7 277 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 PKDREJQ9NTG1 2253 aa14.34□□□□□ -0.11
USB1-214ENST00000568848 PRSS44E7EML9 344 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 PEX12O00623 359 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 MCM3P25205 808 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 ELAVL4P26378 380 aaKnown RBP14.33□□□□□ -0.12
USB1-214ENST00000568848 PEBP1P30086 187 aaKnown RBP14.33□□□□□ -0.12
USB1-214ENST00000568848 PRLHRP49683 370 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 KCNK10P57789 538 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 TPM4P67936 248 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 SSPNQ14714 243 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 ZRSR2Q15696 482 aaKnown RBP14.33□□□□□ -0.12
USB1-214ENST00000568848 SP5Q6BEB4 398 aaPredicted RBP14.33□□□□□ -0.12
USB1-214ENST00000568848 SPESP1Q6UW49 350 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 IGFL3Q6UXB1 125 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 AMIGO1Q86WK6 493 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 MCEMP1Q8IX19 187 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 ST6GALNAC3Q8NDV1 305 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 FLVCR1-AS1Q8TAF5 88 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 HM13Q8TCT9 377 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 FER1L6-AS2Q96M78 137 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 OR2A14Q96R47 310 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 FCRL5Q96RD9 977 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 NDOR1Q9UHB4 597 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 TFR2Q9UP52 801 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 LUC7L2Q9Y383 392 aaKnown RBP14.33□□□□□ -0.12
USB1-214ENST00000568848 DCHS2Q6V1P9 2916 aa14.33□□□□□ -0.12
USB1-214ENST00000568848 HIVEP1P15822 2718 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 GOLGA6L19H0YKK7 550 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 F10P00742 488 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 PTMSP20962 102 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 COMTP21964 271 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 NDUFS1P28331 727 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 CYP2A13Q16696 494 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 ASTE1Q2TB18 679 aaPredicted RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 MRPL14Q6P1L8 145 aaKnown RBP14.32□□□□□ -0.12
USB1-214ENST00000568848 UNC5AQ6ZN44 842 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 LINC00696Q6ZRV3 163 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 TAX1BP1Q86VP1 789 aa14.32□□□□□ -0.12
USB1-214ENST00000568848 HPS6Q86YV9 775 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms