RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 CSF2RBP32927 897 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 HADHAP40939 763 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 SLC1A2P43004 574 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 MAGEA4P43358 317 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 PREPP48147 710 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 ARL4CP56559 192 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 PRAMEP78395 509 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 HIF1AQ16665 826 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 KYNUQ16719 465 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 LACTB2Q53H82 288 aaPredicted RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 FASTKD1Q53R41 847 aaKnown RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 LDLRAP1Q5SW96 308 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 ATP1A1-AS1Q5TC04 95 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 NKAIN2Q5VXU1 208 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 AFTPHQ6ULP2 937 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 ZNF438Q7Z4V0 828 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 PCGF5Q86SE9 256 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 GALNT13Q8IUC8 556 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 TRAPPC5Q8IUR0 188 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 RAVER1Q8IY67 606 aaKnown RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 ZBED8Q8IZ13 594 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 OTUD6BQ8N6M0 293 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 CEP112Q8N8E3 955 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 MNS1Q8NEH6 495 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 DTX3LQ8TDB6 740 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 ZDHHC1Q8WTX9 485 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 MIB2Q96AX9 1013 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 BIRC8Q96P09 236 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 CATSPER2Q96P56 530 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 COPS8Q99627 209 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 ZMYND15Q9H091 742 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 P2RY12Q9H244 342 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 KCTD5Q9NXV2 234 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 SLC39A1Q9NY26 324 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 NINJ2Q9NZG7 142 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 TMEM9Q9P0T7 183 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 VPS18Q9P253 973 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 ZNF624Q9P2J8 865 aaPredicted RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 ZC3H7BQ9UGR2 993 aaKnown RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 CIDEBQ9UHD4 219 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 CRYL1Q9Y2S2 319 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 UTP11Q9Y3A2 253 aaKnown RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 PCDHGA3Q9Y5H0 932 aa8.18□□□□□ -1.1
TSC2-223ENST00000568566 CFAP20Q9Y6A4 193 aaKnown RBP8.18□□□□□ -1.1
TSC2-223ENST00000568566 ZNF106Q9H2Y7 1883 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 OR52A4PA6NMU1 304 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 EFCAB7A8K855 629 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 VEGFDO43915 354 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 USP1O94782 785 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 AHSGP02765 367 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 TPBGLP0DKB5 382 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 ATP1B2P14415 290 aaPredicted RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 NR1D1P20393 614 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 KELP23276 732 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 CD1CP29017 333 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 OAS2P29728 719 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 CCR7P32248 378 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 CSTF2P33240 577 aaKnown RBP eCLIP8.17□□□□□ -1.1
TSC2-223ENST00000568566 SLC19A1P41440 591 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 UQCRFS1P47985 274 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 EIF3BP55884 814 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 PDE1BQ01064 536 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 CDC20Q12834 499 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 CALCOCO2Q13137 446 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 BIRC2Q13490 618 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 ITGA9Q13797 1035 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 DEFB109BQ30KR1 87 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 GPR33Q49SQ1 333 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 DNAJC21Q5F1R6 531 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 RBM20Q5T481 1227 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 TEDDM1Q5T9Z0 273 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 ANKS6Q68DC2 871 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 PDPK2PQ6A1A2 396 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 ZNF470Q6ECI4 717 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 NLRP9Q7RTR0 991 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 LRRTM4Q86VH4 590 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 KCNMB4Q86W47 210 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 CFAP206Q8IYR0 622 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 PDIK1LQ8N165 341 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
TSC2-223ENST00000568566 AGBL5Q8NDL9 886 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 LPGAT1Q92604 370 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 KIAA1143Q96AT1 154 aaPredicted RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 ULK4Q96C45 1275 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 MRRFQ96E11 262 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 ABHD17AQ96GS6 310 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 SLC45A3Q96JT2 553 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 RMDN2Q96LZ7 410 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 INSM2Q96T92 566 aaPredicted RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 NDNQ99608 321 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 DDA1Q9BW61 102 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 WWP1Q9H0M0 922 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 RAB17Q9H0T7 212 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 CDH19Q9H159 772 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 OSGEPL1Q9H4B0 414 aa8.17□□□□□ -1.1
TSC2-223ENST00000568566 GPN2Q9H9Y4 310 aaPredicted RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 TRNAU1APQ9NX07 287 aaKnown RBP8.17□□□□□ -1.1
TSC2-223ENST00000568566 OCIAD1Q9NX40 245 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms