RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 DSELQ8IZU8 1212 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 DNAAF3Q8N9W5 541 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 SPC24Q8NBT2 197 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 OR13J1Q8NGT2 312 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 FRMD8P1Q9BZ68 369 aaPredicted RBP18.33■□□□□ 0.52
SPSB3-210ENST00000568416 CHST8Q9H2A9 424 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 ACTR10Q9NZ32 417 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 RIMKLBQ9ULI2 386 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 ICKQ9UPZ9 632 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 BOD1L1Q8NFC6 3051 aa18.33■□□□□ 0.52
SPSB3-210ENST00000568416 SLC5A10A0PJK1 596 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 HEATR9A2RTY3 570 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 TMEM150CB9EJG8 249 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 RAB40ALP0C0E4 278 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 PVRP15151 417 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 FDFT1P37268 417 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 GRIA1P42261 906 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 LMAN1P49257 510 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 TSTD2Q5T7W7 516 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 SEL1L2Q5TEA6 688 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 SLC13A5Q86YT5 568 aaPredicted RBP18.32■□□□□ 0.52
SPSB3-210ENST00000568416 OR5AR1Q8NGP9 310 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 ELMO1Q92556 727 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 RANBP9Q96S59 729 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 TRIM55Q9BYV6 548 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 PCMTD2Q9NV79 361 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 SLC2A6Q9UGQ3 507 aa18.32■□□□□ 0.52
SPSB3-210ENST00000568416 ASH1LQ9NR48 2969 aaKnown RBP18.31■□□□□ 0.52
SPSB3-210ENST00000568416 DNAJB5O75953 348 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 PDGFAP04085 211 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 OR56A5P0C7T3 313 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 TPBGLP0DKB5 382 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 SHMT2P34897 504 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 ACVR1Q04771 509 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 BRD3Q15059 726 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 IGFBP7Q16270 282 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 COLEC12Q5KU26 742 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 LYPLAL1Q5VWZ2 237 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 SPESP1Q6UW49 350 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 CDHR3Q6ZTQ4 885 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 ASB18Q6ZVZ8 466 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 TBC1D21Q8IYX1 336 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 ADAMTS17Q8TE56 1095 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 UBE2Q2Q8WVN8 375 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 HDAC10Q969S8 669 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 CLIP3Q96DZ5 547 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 KLHL25Q9H0H3 589 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 ACTR5Q9H9F9 607 aaPredicted RBP18.31■□□□□ 0.52
SPSB3-210ENST00000568416 CASS4Q9NQ75 786 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 SERTAD3Q9UJW9 196 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 ZNF148Q9UQR1 794 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 ASF1AQ9Y294 204 aa18.31■□□□□ 0.52
SPSB3-210ENST00000568416 BHMG1C9JSJ3 638 aaPredicted RBP18.3■□□□□ 0.52
SPSB3-210ENST00000568416 MAP3K7O43318 606 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 OR1I1O60431 355 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 GAS8O95995 478 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 GOT2P00505 430 aaKnown RBP18.3■□□□□ 0.52
SPSB3-210ENST00000568416 IFNB1P01574 187 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 CAPN1P07384 714 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 CYP2A7P20853 494 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 ADRA1DP25100 572 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 PLOD1Q02809 727 aaPredicted RBP18.3■□□□□ 0.52
SPSB3-210ENST00000568416 CPZQ66K79 652 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 AFTPHQ6ULP2 937 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 NAPRTQ6XQN6 538 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 PPP1R21Q6ZMI0 780 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 UNC5AQ6ZN44 842 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 ZNF534Q76KX8 674 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 PRUNE1Q86TP1 453 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 ENDOVQ8N8Q3 282 aaKnown RBP18.3■□□□□ 0.52
SPSB3-210ENST00000568416 C1orf54Q8WWF1 131 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.3■□□□□ 0.524e-13■■■■■ 88.3
SPSB3-210ENST00000568416 ZNF778Q96MU6 729 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 OR2A14Q96R47 310 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 NLNQ9BYT8 704 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 POLG2Q9UHN1 485 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 GUCA1BQ9UMX6 200 aa18.3■□□□□ 0.52
SPSB3-210ENST00000568416 E7EQ34 232 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 ETS1P14921 441 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 UGT2B7P16662 529 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 GABRA4P48169 554 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 ITGA1P56199 1179 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 SYTL3Q4VX76 610 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 FAM198BQ6UWH4 519 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 TRIM73Q86UV7 250 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 SYTL1Q8IYJ3 562 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 C19orf47Q8N9M1 422 aaKnown RBP18.29■□□□□ 0.52
SPSB3-210ENST00000568416 TEX19Q8NA77 164 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 GLIS1Q8NBF1 620 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 OR5K2Q8NHB8 316 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 FLVCR1-AS1Q8TAF5 88 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 SGSM3Q96HU1 749 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 TTC1Q99614 292 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 TSGA10Q9BZW7 698 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 FAM60AQ9NP50 221 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 RAB6BQ9NRW1 208 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 TCFL5Q9UL49 500 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 SNX7Q9UNH6 387 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 TCAF1Q9Y4C2 921 aa18.29■□□□□ 0.52
SPSB3-210ENST00000568416 MYO18BQ8IUG5 2567 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms