RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SIM1P81133 766 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-222ENST00000568034 ILKQ13418 452 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 GRB7Q14451 532 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 MAP9Q49MG5 647 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 TBC1D21Q8IYX1 336 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 ZFPM2Q8WW38 1151 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 JPH3Q8WXH2 748 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-222ENST00000568034 LINGO1Q96FE5 620 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 FERD3LQ96RJ6 166 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 HGH1Q9BTY7 390 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 MVB12BQ9H7P6 319 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 SLC24A2Q9UI40 661 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 ARHGEF33A8MVX0 844 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 PSIP1O75475 530 aaKnown RBP17.51■□□□□ 0.39
COMMD4-222ENST00000568034 C1orf105O95561 183 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 SLC35E2BP0CK96 405 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 STMN1P16949 149 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 OR1D5P58170 312 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 PUM1Q14671 1186 aaKnown RBP eCLIP17.51■□□□□ 0.39
COMMD4-222ENST00000568034 CCSMST1Q4G0I0 132 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.51■□□□□ 0.39
COMMD4-222ENST00000568034 Q8N9G6 341 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-222ENST00000568034 OR2W6PQ8NHA6 318 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 CFAP61Q8NHU2 1237 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 MZB1Q8WU39 189 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 ASB11Q8WXH4 323 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 SH3KBP1Q96B97 665 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 TSPAN17Q96FV3 270 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 PDLIM5Q96HC4 596 aaKnown RBP17.51■□□□□ 0.39
COMMD4-222ENST00000568034 SLC38A3Q99624 504 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 MENTQ9BUN1 341 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 TRIT1Q9H3H1 467 aaKnown RBP17.51■□□□□ 0.39
COMMD4-222ENST00000568034 GPAMQ9HCL2 828 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 SNX15Q9NRS6 342 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 OGFRQ9NZT2 677 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-222ENST00000568034 CTNNAL1Q9UBT7 734 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 COLEC10Q9Y6Z7 277 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 SPTBN4Q9H254 2564 aa17.51■□□□□ 0.39
COMMD4-222ENST00000568034 IGHV1OR21-1A0A087WYE8 117 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 KRT87PA6NCN2 255 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 GFYI3L273 518 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 NTN3O00634 580 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-222ENST00000568034 TCEA3O75764 348 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 CNTFP26441 200 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 RGS4P49798 205 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 EPHA4P54764 986 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 SLC12A2P55011 1212 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 IL2P60568 153 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 CCL7P80098 99 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 PRKG2Q13237 762 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 BIRC2Q13490 618 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 BEND6Q5SZJ8 279 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-222ENST00000568034 LRRC8EQ6NSJ5 796 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 TDRPQ86YL5 185 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 DCUN1D3Q8IWE4 304 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 OR52E1Q8NGJ3 308 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 EPS8L3Q8TE67 593 aaKnown RBP17.5■□□□□ 0.39
COMMD4-222ENST00000568034 SKA2Q8WVK7 121 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-222ENST00000568034 DLG3Q92796 817 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-222ENST00000568034 SYTL2Q9HCH5 934 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 PSMC3IPQ9P2W1 217 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-222ENST00000568034 ADAMTS6Q9UKP5 1117 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 IKBKGQ9Y6K9 419 aa17.5■□□□□ 0.39
COMMD4-222ENST00000568034 TRIM49D1C9J1S8 452 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 OPA1O60313 960 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 RPLP0P05388 317 aaKnown RBP17.49■□□□□ 0.39
COMMD4-222ENST00000568034 CD1CP29017 333 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 ALDH4A1P30038 563 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 CSF2RBP32927 897 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 SERPINB8P50452 374 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 INSM1Q01101 510 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-222ENST00000568034 CFHR1Q03591 330 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 DLG1Q12959 904 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 RASA2Q15283 850 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 CCDC157Q569K6 752 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 NKAIN2Q5VXU1 208 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 MYO1HQ8N1T3 1032 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 NKAPQ8N5F7 415 aaKnown RBP17.49■□□□□ 0.39
COMMD4-222ENST00000568034 FBXO15Q8NCQ5 510 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-222ENST00000568034 RSC1A1Q92681 617 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 UBXN10Q96LJ8 280 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 CCDC77Q9BR77 488 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 TWSG1Q9GZX9 223 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 LRRN3Q9H3W5 708 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 TFB2MQ9H5Q4 396 aaKnown RBP17.49■□□□□ 0.39
COMMD4-222ENST00000568034 KCNK4Q9NYG8 393 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 PLAGL1Q9UM63 463 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 ICKQ9UPZ9 632 aa17.49■□□□□ 0.39
COMMD4-222ENST00000568034 UNC13CQ8NB66 2214 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 KRT38O76015 456 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 C2P06681 752 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 SNRPAP09012 282 aaKnown RBP17.48■□□□□ 0.39
COMMD4-222ENST00000568034 CRABP2P29373 138 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 SLCO1A2P46721 670 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 CLDN6P56747 220 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 GPLD1P80108 840 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 SQSTM1Q13501 440 aa17.48■□□□□ 0.39
COMMD4-222ENST00000568034 KRT33BQ14525 404 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms