RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 A0A1W2PPC1 479 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 NPEPPSL1A6NEC2 478 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 FABP12A6NFH5 140 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 IRAK2O43187 625 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ACSL4O60488 711 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ATP6V1G1O75348 118 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 FAM155BO75949 473 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TACR2P21452 398 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 THOP1P52888 689 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TXNL4AP83876 142 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 SIM2Q14190 667 aaPredicted RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PPM1JQ5JR12 505 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 MEDAGQ5VYS4 303 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 CNKSR3Q6P9H4 555 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 RTL4Q6ZR62 310 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 RANBP3LQ86VV4 465 aaPredicted RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 UXS1Q8NBZ7 420 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 OR8J3Q8NGG0 315 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 CCDC107Q8WV48 283 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 APOLD1Q96LR9 279 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 KCTD7Q96MP8 289 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 CGREF1Q99674 301 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ZDHHC4Q9NPG8 344 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ITM2CQ9NQX7 267 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 FKBP14Q9NWM8 211 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TOR4AQ9NXH8 423 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PACSIN3Q9UKS6 424 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TDRKHQ9Y2W6 561 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PCDHB9Q9Y5E1 797 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 WDR90Q96KV7 1748 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 EI24O14681 340 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ARPC2O15144 300 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ACOX3O15254 700 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PI15O43692 258 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ITM2AO43736 263 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PLOD3O60568 738 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TSPAN1O60635 241 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TBL1XO60907 577 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ANXA4P09525 319 aaPredicted RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 RBM34P42696 430 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 MAGEA8P43361 318 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 CCR10P46092 362 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 OR2B6P58173 313 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 RPL19P84098 196 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 RHAGQ02094 409 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 EMX2Q04743 252 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 INCA1Q0VD86 236 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 CBLBQ13191 982 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 KCNC3Q14003 757 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 SUZ12Q15022 739 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF181Q2M3W8 571 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 SMU1Q2TAY7 513 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF404Q494X3 552 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 SPIN4Q56A73 249 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 VARS2Q5ST30 1063 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 OR2T5Q6IEZ7 315 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PDE12Q6L8Q7 609 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 C11orf74Q86VG3 221 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PLCZ1Q86YW0 608 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 C12orf29Q8N999 325 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 C7orf57Q8NEG2 295 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 OR2T29Q8NH02 315 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 GEMIN6Q8WXD5 167 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 RERGQ96A58 199 aaPredicted RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ACDQ96AP0 544 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 C11orf24Q96F05 449 aaPredicted RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ZBED6CLQ96FA7 236 aaPredicted RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 C12orf66Q96MD2 445 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 PSKH2Q96QS6 385 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 MGME1Q9BQP7 344 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 AARSD1Q9BTE6 412 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TRIM2Q9C040 744 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ZDHHC6Q9H6R6 413 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 TM9SF3Q9HD45 589 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 CCDC177Q9NQR7 707 aaPredicted RBP4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 ASAH2Q9NR71 780 aa4.28□□□□□ -1.72
LPCAT2-208ENST00000566915 COL5A3P25940 1745 aaPredicted RBP4.28□□□□□ -1.73
LPCAT2-208ENST00000566915 ARFGEF2Q9Y6D5 1785 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 H3BM21 787 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TSPAN3O60637 253 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A9O60656 530 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ENDOD1O94919 500 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ARHGEF15O94989 841 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SOX30O94993 753 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 GADD45GO95257 159 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 S100A6P06703 90 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ADH1AP07327 375 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ATXN8OSP0DMR3 200 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 COL6A1P12109 1028 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 CREB1P16220 341 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 CD36P16671 472 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A6P19224 532 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 CD247P20963 164 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A1P22309 533 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A4P22310 534 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 GLDCP23378 1020 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 HTR1BP28222 390 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms