RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 INSM2Q96T92 566 aaPredicted RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 POPDC3Q9HBV1 291 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 GPAMQ9HCL2 828 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 SNX15Q9NRS6 342 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 ZNF624Q9P2J8 865 aaPredicted RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 CPNE7Q9UBL6 633 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 CTNNAL1Q9UBT7 734 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 RUVBL2Q9Y230 463 aaKnown RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 PLAAQ9Y263 795 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 ASF1AQ9Y294 204 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 HEBP2Q9Y5Z4 205 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 U3KQA8 63 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 LAMA1P25391 3075 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 CNOT1A5YKK6 2376 aaKnown RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 WDR87Q6ZQQ6 2873 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 ASXL3Q9C0F0 2248 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 RP1P56715 2156 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 UQCRHLA0A096LP55 91 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 IQANK1A0A1B0GTG1 560 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 HMX2A2RU54 273 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 TRIM49D1C9J1S8 452 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 EIF3FO00303 357 aaPredicted RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 SLC30A4O14863 429 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 CBFA2T3O75081 653 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 LDOC1O95751 146 aaPredicted RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 VIPP01282 170 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 UQCRHP07919 91 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 SNRPAP09012 282 aaKnown RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 CKMT1AP12532 417 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 ACADLP28330 430 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 BDKRB1P46663 353 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 FASLGP48023 281 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 KRT33BQ14525 404 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 TAF1BQ53T94 588 aaPredicted RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 BEND6Q5SZJ8 279 aaPredicted RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 LGSNQ5TDP6 509 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 CAPRIN2Q6IMN6 1127 aaKnown RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 GUSBP11Q6P575 273 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 NEK10Q6ZWH5 1172 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 MYO1HQ8N1T3 1032 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 ARL14Q8N4G2 192 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 DEFB124Q8NES8 71 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 CFAP61Q8NHU2 1237 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 HNRNPLLQ8WVV9 542 aaKnown RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 TFGQ92734 400 aaPredicted RBP11.19□□□□□ -0.62
KARS-207ENST00000566560 NAT6Q93015 286 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 FOPNLQ96NB1 174 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 CDC6Q99741 560 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 HGH1Q9BTY7 390 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 SLC32A1Q9H598 525 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 SYTL2Q9HCH5 934 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 TBK1Q9UHD2 729 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 PADI4Q9UM07 663 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 RNF215Q9Y6U7 377 aa11.19□□□□□ -0.62
KARS-207ENST00000566560 DNAH14Q0VDD8 3507 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 CPED1A4D0V7 1026 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 RHPN2P1A8MT19 583 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 RASGRF2O14827 1237 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 NUDT21O43809 227 aaKnown RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 CDH16O75309 829 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 TCEA3O75764 348 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 WISP3O95389 354 aaPredicted RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 TSPAN12O95859 305 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 ALDOAP04075 364 aaKnown RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 RPN2P04844 631 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 SLC35E2BP0CK96 405 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 MPC1LP0DKB6 136 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 H2AFXP16104 143 aaPredicted RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 GLB1P16278 677 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 XRCC1P18887 633 aaPredicted RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 NDUFS1P28331 727 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 CRABP2P29373 138 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 MAPK9P45984 424 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 DUSP3P51452 185 aaPredicted RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 IL2P60568 153 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 ABRQ12979 859 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 DNAJC3Q13217 504 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 PLCL1Q15111 1095 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 FBXO38Q6PIJ6 1188 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 UNC5DQ6UXZ4 953 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 EFL1Q7Z2Z2 1120 aaKnown RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 ZNF761Q86XN6 746 aaPredicted RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 TDRPQ86YL5 185 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 DCUN1D3Q8IWE4 304 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 CNPY4Q8N129 248 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 RIBC1Q8N443 379 aaPredicted RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 NKAPQ8N5F7 415 aaKnown RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 OR6C4Q8NGE1 309 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 OR5AR1Q8NGP9 310 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 OR5K2Q8NHB8 316 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 EEF1AKMT1Q8WVE0 214 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 ISL2Q96A47 359 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 CCDC74AQ96AQ1 378 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 TRIT1Q9H3H1 467 aaKnown RBP11.18□□□□□ -0.62
KARS-207ENST00000566560 MVB12BQ9H7P6 319 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 NFS1Q9Y697 457 aa11.18□□□□□ -0.62
KARS-207ENST00000566560 COLEC10Q9Y6Z7 277 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms