RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 RAD18Q9NS91 495 aa9.14□□□□□ -0.95
BBS4-210ENST00000566400 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.14□□□□□ -0.95
BBS4-210ENST00000566400 EVLQ9UI08 416 aaPredicted RBP9.14□□□□□ -0.95
BBS4-210ENST00000566400 ZNF490Q9ULM2 529 aaPredicted RBP9.14□□□□□ -0.95
BBS4-210ENST00000566400 CCL27Q9Y4X3 112 aa9.14□□□□□ -0.95
BBS4-210ENST00000566400 CPQQ9Y646 472 aa9.14□□□□□ -0.95
BBS4-210ENST00000566400 ELOVL7A1L3X0 281 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 FAM220BPB1ANY3 271 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 GAPDHSO14556 408 aaPredicted RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 TAPBPO15533 448 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 SEC22BO75396 215 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 DNAJB5O75953 348 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 RECQL5O94762 991 aaPredicted RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 GUCA1CO95843 209 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 PGRP06401 933 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 CNPP09543 421 aaKnown RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 ALPIP09923 528 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 NCK1P16333 377 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 BPIP17213 487 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 HLCSP50747 726 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 AP1S2P56377 157 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 ADARB1P78563 741 aaKnown RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 CYP4F3Q08477 520 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 ABRQ12979 859 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 TUBA3CQ13748 450 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 KCNC3Q14003 757 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 KIAA0040Q15053 153 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 CDKN3Q16667 212 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 PLA2G4EQ3MJ16 856 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 CYBRD1Q53TN4 286 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 CNKSR3Q6P9H4 555 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 DHRS4L2Q6PKH6 230 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 NEK10Q6ZWH5 1172 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 DDX53Q86TM3 631 aaKnown RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 SPNS2Q8IVW8 549 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 CLEC4FQ8N1N0 589 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 SLC39A11Q8N1S5 342 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 ELMOD1Q8N336 334 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 ZNF555Q8NEP9 628 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 EID2BQ96D98 161 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 SCRN2Q96FV2 425 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 METTL2AQ96IZ6 378 aaKnown RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 ITCHQ96J02 903 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 PPM1MQ96MI6 270 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 SEPHS2Q99611 448 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 THUMPD3Q9BV44 507 aaKnown RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 TM6SF2Q9BZW4 377 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 KCNH6Q9H252 994 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 ACTL8Q9H568 366 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 HPS4Q9NQG7 708 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 KLQ9UEF7 1012 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 ASB1Q9Y576 335 aa9.13□□□□□ -0.95
BBS4-210ENST00000566400 ZNF106Q9H2Y7 1883 aaKnown RBP9.13□□□□□ -0.95
BBS4-210ENST00000566400 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 G3V2T6 193 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 MANBAO00462 879 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 GREM1O60565 184 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 UGDHO60701 494 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 CLDN7O95471 211 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 THRBP10828 461 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
BBS4-210ENST00000566400 CYP2A7P20853 494 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 SLC5A2P31639 672 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 PPM1AP35813 382 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 RPIAP49247 311 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 HTR6P50406 440 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 CLDN8P56748 225 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 OR4D2P58180 307 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 RAB15P59190 212 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 IL18R1Q13478 541 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 PLEKHG6Q3KR16 790 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 HABP4Q5JVS0 413 aaKnown RBP9.12□□□□□ -0.95
BBS4-210ENST00000566400 PLEKHS1Q5SXH7 462 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 NECAB2Q7Z6G3 386 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 EID3Q8N140 333 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 DTWD1Q8N5C7 304 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 GTF2H4Q92759 462 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 TESCQ96BS2 214 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 ZNF583Q96ND8 569 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 RBM4BQ9BQ04 359 aaKnown RBP9.12□□□□□ -0.95
BBS4-210ENST00000566400 RBM4Q9BWF3 364 aaKnown RBP9.12□□□□□ -0.95
BBS4-210ENST00000566400 SLC12A9Q9BXP2 914 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 ING2Q9H160 280 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 ACTR8Q9H981 624 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 PARVBQ9HBI1 364 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 USE1Q9NZ43 259 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 SPG21Q9NZD8 308 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 GMPR2Q9P2T1 348 aaKnown RBP9.12□□□□□ -0.95
BBS4-210ENST00000566400 ZMYM5Q9UJ78 669 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 SLC25A13Q9UJS0 675 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 C3orf18Q9UK00 162 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 INVSQ9Y283 1065 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 MAN2B2Q9Y2E5 1009 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 ORC6Q9Y5N6 252 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 AP1M2Q9Y6Q5 423 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 A0A096LPI6 279 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 TRAV19A0A0A6YYK7 116 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 GNGT2O14610 69 aa9.12□□□□□ -0.95
BBS4-210ENST00000566400 PRMT3O60678 531 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms