RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SNTB2Q13425 540 aaKnown RBP10.47□□□□□ -0.73
UBFD1-205ENST00000566136 SLC44A4Q53GD3 710 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 PRAMEF19Q5SWL8 479 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 PDPK2PQ6A1A2 396 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 MSANTD2Q6P1R3 559 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 OR7G3Q8NG95 312 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 ARL5BQ96KC2 179 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 PWWP2AQ96N64 755 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 FCRL4Q96PJ5 515 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 PSKH2Q96QS6 385 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 PKP2Q99959 881 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 SOX7Q9BT81 388 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 IMPG2Q9BZV3 1241 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 DCLK3Q9C098 648 aa10.47□□□□□ -0.73
UBFD1-205ENST00000566136 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
UBFD1-205ENST00000566136 NUDT21O43809 227 aaKnown RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 GDF9O60383 454 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 CIDEAO60543 219 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 CSDE1O75534 798 aaKnown RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 ZNF821O75541 412 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 TOM1L1O75674 476 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 ASS1P00966 412 aaKnown RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 NUDT17P0C025 328 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 CYBAP13498 195 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 NUP62P37198 522 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 SLC1A1P43005 524 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 CLCN3P51790 818 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 EIF3BP55884 814 aaKnown RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 WNT3P56703 355 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 SLC8A3P57103 927 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 ADAM17P78536 824 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 CALCOCO2Q13137 446 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 BTG3Q14201 252 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 RIPPLY2Q5TAB7 128 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 CACHD1Q5VU97 1274 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 MRPL14Q6P1L8 145 aaKnown RBP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 TRIM72Q6ZMU5 477 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 ERASQ7Z444 233 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 UBASH3BQ8TF42 649 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 TLCD1Q96CP7 247 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 SPATA33Q96N06 139 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 SELENOSQ9BQE4 189 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 SPACA1Q9HBV2 294 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 PDGFCQ9NRA1 345 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 HAO2Q9NYQ3 351 aa10.46□□□□□ -0.73
UBFD1-205ENST00000566136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.46□□□□□ -0.73
UBFD1-205ENST00000566136 LRRC37A2A6NM11 1700 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 A0A1W2PQM1 296 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 ANKRD61A6NGH8 418 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 KDM4EB2RXH2 506 aaPredicted RBP10.46□□□□□ -0.74
UBFD1-205ENST00000566136 H3BQ06 376 aaPredicted RBP10.46□□□□□ -0.74
UBFD1-205ENST00000566136 HDAC3O15379 428 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 PRAMEF4O60810 478 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 ACSL3O95573 720 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 FGBP02675 491 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 GRPP07492 148 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 CYP2F1P24903 491 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 SLC6A4P31645 630 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 SLC11A1P49279 550 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 RFTN1Q14699 578 aaPredicted RBP10.46□□□□□ -0.74
UBFD1-205ENST00000566136 GRIK4Q16099 956 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 MAPK6Q16659 721 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 LRRC26Q2I0M4 334 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 C10orf120Q5SQS8 335 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 CELF3Q5SZQ8 465 aaKnown RBP10.46□□□□□ -0.74
UBFD1-205ENST00000566136 PLEKHA7Q6IQ23 1121 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 DEGS2Q6QHC5 323 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 PRR23CQ6ZRP0 262 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 PHF13Q86YI8 300 aaPredicted RBP10.46□□□□□ -0.74
UBFD1-205ENST00000566136 ZBTB8OSQ8IWT0 167 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 ELP5Q8TE02 316 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 CLEC4CQ8WTT0 213 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 SMC6Q96SB8 1091 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 CITED1Q99966 193 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 CCDC134Q9H6E4 229 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 CNOT10Q9H9A5 744 aaKnown RBP10.46□□□□□ -0.74
UBFD1-205ENST00000566136 IL1RAPL1Q9NZN1 696 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 STOML1Q9UBI4 398 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 EVPLQ92817 2033 aa10.46□□□□□ -0.74
UBFD1-205ENST00000566136 GOLGA8SH3BPF8 625 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 M0QYG6 137 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 ABLIM1O14639 778 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 OGTO15294 1046 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 OR6B1O95007 311 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 MFN2O95140 757 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 SLC25A27O95847 323 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 CLUP10909 449 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 GJA4P35212 333 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 PTGS2P35354 604 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 RAP1GAPP47736 663 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 FOXC1Q12948 553 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 FHL3Q13643 280 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 SEZ6L2Q6UXD5 910 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 RANBP10Q6VN20 620 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 TAS2R42Q7RTR8 314 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 MCEMP1Q8IX19 187 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 FEZF2Q8TBJ5 459 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 GLMPQ8WWB7 406 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms