RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 GBX1Q14549 363 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 SEPT7Q16181 437 aaKnown RBP25.32■■□□□ 1.64
NME3-208ENST00000565379 C14orf28Q4W4Y0 310 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 CAPRIN2Q6IMN6 1127 aaKnown RBP25.32■■□□□ 1.64
NME3-208ENST00000565379 XKR5Q6UX68 686 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 RBM12BQ8IXT5 1001 aaKnown RBP25.32■■□□□ 1.64
NME3-208ENST00000565379 CD200R1Q8TD46 325 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 ATXN7L3BQ96GX2 97 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 DHRS4Q9BTZ2 278 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 WWP1Q9H0M0 922 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 KIF26BQ2KJY2 2108 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 A0A1W2PNU3 283 aaPredicted RBP25.31■■□□□ 1.64
NME3-208ENST00000565379 PMS2P1A4D2B8 440 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 EME2A4GXA9 379 aaPredicted RBP25.31■■□□□ 1.64
NME3-208ENST00000565379 POC1B-GALNT4F8VUJ3 575 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 NOBOXO60393 691 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 ITPKBP27987 946 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 NDUFS1P28331 727 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 ABCG1P45844 678 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 RGS4P49798 205 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 CDKN2DP55273 166 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 NEK10Q6ZWH5 1172 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 CCDC91Q7Z6B0 441 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 CACTIN-AS1Q8N1I8 211 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 LILRA3Q8N6C8 439 aaPredicted RBP25.31■■□□□ 1.64
NME3-208ENST00000565379 SIDT2Q8NBJ9 832 aaKnown RBP25.31■■□□□ 1.64
NME3-208ENST00000565379 ZFPM2Q8WW38 1151 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 SH3KBP1Q96B97 665 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 SYTL2Q9HCH5 934 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 POT1Q9NUX5 634 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 CDYLQ9Y232 598 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 MTO1Q9Y2Z2 717 aaKnown RBP25.31■■□□□ 1.64
NME3-208ENST00000565379 PTPRQQ9UMZ3 2332 aa25.31■■□□□ 1.64
NME3-208ENST00000565379 TCEA3O75764 348 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 MPOP05164 745 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 BRAFP15056 766 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 FASLGP48023 281 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 PREPP48147 710 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 BIRC2Q13490 618 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 USP10Q14694 798 aaKnown RBP25.3■■□□□ 1.64
NME3-208ENST00000565379 ADGRD1Q6QNK2 874 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 NAT6Q93015 286 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 CXorf40BQ96DE9 158 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 MRRFQ96E11 262 aaKnown RBP25.3■■□□□ 1.64
NME3-208ENST00000565379 ABCG4Q9H172 646 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 ARGLU1Q9NWB6 273 aaPredicted RBP25.3■■□□□ 1.64
NME3-208ENST00000565379 SLC39A10Q9ULF5 831 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 WDR37Q9Y2I8 494 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 COLEC10Q9Y6Z7 277 aa25.3■■□□□ 1.64
NME3-208ENST00000565379 ZW10O43264 779 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 NUDT21O43809 227 aaKnown RBP25.29■■□□□ 1.64
NME3-208ENST00000565379 FAM155BO75949 473 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 EML2O95834 649 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 RPN2P04844 631 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 GLB1P16278 677 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 STMN1P16949 149 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 PDHA2P29803 388 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 TIAL1Q01085 375 aaKnown RBP eCLIP25.29■■□□□ 1.64
NME3-208ENST00000565379 CLCA4Q14CN2 919 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 RASA2Q15283 850 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 RPE65Q16518 533 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 TRIM48Q8IWZ4 208 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 ARL14Q8N4G2 192 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 SLC37A2Q8TED4 501 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 DCAKDQ8WVC6 231 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 FAM136AQ96C01 138 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 MTBPQ96DY7 904 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 C12orf66Q96MD2 445 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 FOPNLQ96NB1 174 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 BBC3Q96PG8 261 aaPredicted RBP25.29■■□□□ 1.64
NME3-208ENST00000565379 OLFM1Q99784 485 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 GALPQ9UBC7 116 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 PADI4Q9UM07 663 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 PSMD13Q9UNM6 376 aa25.29■■□□□ 1.64
NME3-208ENST00000565379 ZFC3H1O60293 1989 aaKnown RBP25.29■■□□□ 1.64
NME3-208ENST00000565379 VIPP01282 170 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 MPC1LP0DKB6 136 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 MTHFD1P11586 935 aaKnown RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 PNLIPP16233 465 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 ACADLP28330 430 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 CRABP2P29373 138 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 TAS2R39P59534 338 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 UBE2IP63279 158 aaKnown RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 UNC5DQ6UXZ4 953 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 NAPRTQ6XQN6 538 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 TDRPQ86YL5 185 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 NKAPQ8N5F7 415 aaKnown RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 GIMAP7Q8NHV1 300 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 TFGQ92734 400 aaPredicted RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 RMDN2Q96LZ7 410 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 DEPDC7Q96QD5 511 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 INSM2Q96T92 566 aaPredicted RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 ROPN1BQ9BZX4 212 aaPredicted RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 MVB12BQ9H7P6 319 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 SYNDIG1Q9H7V2 258 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 UCK1Q9HA47 277 aa25.28■■□□□ 1.64
NME3-208ENST00000565379 ROPN1Q9HAT0 212 aaPredicted RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 SCHIP1Q9P0W5 487 aaPredicted RBP25.28■■□□□ 1.64
NME3-208ENST00000565379 PSMC3IPQ9P2W1 217 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms