RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CIDEBQ9UHD4 219 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 IL17BQ9UHF5 180 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 RARRES3Q9UL19 164 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 RIMKLBQ9ULI2 386 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 PLAGL1Q9UM63 463 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 ASF1AQ9Y294 204 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 RPS6KL1Q9Y6S9 549 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 MGAQ8IWI9 3026 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 SLC9B1P1A6NJY1 282 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 ZNF891A8MT65 544 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 GOLGA8KD6RF30 607 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 GOLGA8TH3BQL2 631 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 QSOX1O00391 747 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 BTN3A3O00478 584 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 BTN3A1O00481 513 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 LIN7AO14910 233 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 NKX2-8O15522 239 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 KATNA1O75449 491 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 NTRK1P04629 796 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 FAM87AP0C7U9 286 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 FGF5P12034 268 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 PVRP15151 417 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 DLSTP36957 453 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 NPY2RP49146 381 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 PTK6Q13882 451 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 IL11RAQ14626 422 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 ZNF658BQ4V348 819 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 ATP1A1-AS1Q5TC04 95 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 LYPLAL1Q5VWZ2 237 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 ANKRD22Q5VYY1 191 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 LRRC8BQ6P9F7 803 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 PACS1Q6VY07 963 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 SYDE1Q6ZW31 735 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 NLRP9Q7RTR0 991 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 EXD3Q8N9H8 876 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 MCUQ8NE86 351 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 CFAP61Q8NHU2 1237 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 LKAAEAR1Q8TD35 194 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 ZFPM2Q8WW38 1151 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 PEX13Q92968 403 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 SLC41A2Q96JW4 573 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 CD180Q99467 661 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 IL22Q9GZX6 179 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 MVB12BQ9H7P6 319 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 FGF21Q9NSA1 209 aa13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 TSR3Q9UJK0 312 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 SNRNP200O75643 2136 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-204ENST00000565023 GOLGA8MH3BSY2 632 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 CD3EAPO15446 510 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 TMEM63AO94886 807 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 TUBB4AP04350 444 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 F8A1P23610 371 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 IVDP26440 423 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 PPARGP37231 505 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 STAT5AP42229 794 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 CD151P48509 253 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 HSD11B2P80365 405 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 SARNPP82979 210 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 DR1Q01658 176 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 ACY1Q03154 408 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 ACVR1Q04771 509 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 ABHD18Q0P651 414 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 HSPA14Q0VDF9 509 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 RPA4Q13156 261 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 TMTC4Q5T4D3 741 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 PTRHD1Q6GMV3 140 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 PWWP2BQ6NUJ5 590 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 CASC4Q6P4E1 433 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 ZNF572Q7Z3I7 529 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 TRIM73Q86UV7 250 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 CAND1Q86VP6 1230 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 NAT8LQ8N9F0 302 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 SPATA4Q8NEY3 305 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 STARD8Q92502 1023 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 MED8Q96G25 268 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 TRIT1Q9H3H1 467 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 CROTQ9UKG9 612 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 POMT2Q9UKY4 750 aa13.23□□□□□ -0.29
VPS9D1-204ENST00000565023 SLC5A10A0PJK1 596 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 F8W8V4 182 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 KIF2AO00139 706 aaPredicted RBP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 AVILO75366 819 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 NDUFS3O75489 264 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 ZBTB11O95625 1053 aaPredicted RBP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 GSTM1P09488 218 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 MLNP12872 115 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 ST6GAL1P15907 406 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 TCN2P20062 427 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 PRDX3P30048 256 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 CCR7P32248 378 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 GSTM4Q03013 218 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 NFATC3Q12968 1075 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 ABRQ12979 859 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 DHX34Q14147 1143 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 AARS2Q5JTZ9 985 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 RNASEH2BQ5TBB1 312 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 PRAMEF17Q5VTA0 474 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 279.2 ms