RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 LATS2Q9NRM7 1088 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 C1GALT1Q9NS00 363 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 KCND1Q9NSA2 647 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ACTR10Q9NZ32 417 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 PAK5Q9P286 719 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 KCND3Q9UK17 655 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 RIMKLBQ9ULI2 386 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ICKQ9UPZ9 632 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 POLHQ9Y253 713 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 TCAF1Q9Y4C2 921 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 PCDHB3Q9Y5E6 796 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 CDC14CA4D256 554 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 C2orf74A8MZ97 194 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 TMEM150CB9EJG8 249 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 BHMG1C9JSJ3 638 aaPredicted RBP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 QSOX1O00391 747 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 WISP1O95388 367 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 FGGP02679 453 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 CCDC175P0C221 793 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 ADRA1DP25100 572 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 CSE1LP55060 971 aaKnown RBP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 PRAMEP78395 509 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 CRADDP78560 199 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 CCZ1BP86790 482 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 CCZ1P86791 482 aaPredicted RBP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 IL10RAQ13651 578 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 CCNG2Q16589 344 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 TMTC4Q5T4D3 741 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 LCN10Q6JVE6 187 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF449Q6P9G9 518 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 DRICH1Q6PGQ1 229 aaPredicted RBP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF517Q6ZMY9 492 aaPredicted RBP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF662Q6ZS27 426 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 TRIM73Q86UV7 250 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 OR6P1Q8NGX9 317 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 OR4L1Q8NH43 312 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 OR1L3Q8NH93 324 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 FLVCR1-AS1Q8TAF5 88 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 LKAAEAR1Q8TD35 194 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 UBE2Q2Q8WVN8 375 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 SGSM3Q96HU1 749 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 TRAPPC9Q96Q05 1148 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 TWSG1Q9GZX9 223 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 EIF2B3Q9NR50 452 aaKnown RBP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 CHRAC1Q9NRG0 131 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 MARCH4Q9P2E8 410 aaPredicted RBP9.72□□□□□ -0.85
CMTM3-209ENST00000565003 ASF1AQ9Y294 204 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 TENM4Q6N022 2769 aa9.72□□□□□ -0.85
CMTM3-209ENST00000565003 PIPSLA2A3N6 862 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 IQCF5A8MTL0 148 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 K7EM74 188 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CHRM5P08912 532 aaPredicted RBP9.71□□□□□ -0.86
CMTM3-209ENST00000565003 OR56A5P0C7T3 313 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 MSL3P1P0C860 447 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 UGT2B7P16662 529 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 NR1D1P20393 614 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 PTPN4P29074 926 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CCR7P32248 378 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CXCR5P32302 372 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 SHMT2P34897 504 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 RORAP35398 523 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 SESN2P58004 480 aaPredicted RBP9.71□□□□□ -0.86
CMTM3-209ENST00000565003 BASP1P80723 227 aaKnown RBP9.71□□□□□ -0.86
CMTM3-209ENST00000565003 TLE1Q04724 770 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 SYTL3Q4VX76 610 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 PLEKHS1Q5SXH7 462 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 LYPLAL1Q5VWZ2 237 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 SPESP1Q6UW49 350 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 UNC5AQ6ZN44 842 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CDHR3Q6ZTQ4 885 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 NLRP9Q7RTR0 991 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 LDB1Q86U70 411 aaPredicted RBP9.71□□□□□ -0.86
CMTM3-209ENST00000565003 VRK3Q8IV63 474 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 LRRC8AQ8IWT6 810 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 PPHLN1Q8NEY8 458 aaKnown RBP9.71□□□□□ -0.86
CMTM3-209ENST00000565003 OR5K2Q8NHB8 316 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CPT1BQ92523 772 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 PEX13Q92968 403 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 MR1Q95460 341 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 LRFN5Q96NI6 719 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 GPR87Q9BY21 358 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 EPN3Q9H201 632 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CHST8Q9H2A9 424 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CLMPQ9H6B4 373 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 FANCEQ9HB96 536 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 FAM60AQ9NP50 221 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 TREX1Q9NSU2 369 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 PCMTD2Q9NV79 361 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 SPHK1Q9NYA1 384 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 PLAGL1Q9UM63 463 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 CDYLQ9Y232 598 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 TP53TG5Q9Y2B4 290 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 TDRKHQ9Y2W6 561 aaKnown RBP9.71□□□□□ -0.86
CMTM3-209ENST00000565003 MYO18BQ8IUG5 2567 aa9.71□□□□□ -0.86
CMTM3-209ENST00000565003 FLNBO75369 2602 aaKnown RBP9.7□□□□□ -0.86
CMTM3-209ENST00000565003 MEN1O00255 615 aa9.7□□□□□ -0.86
CMTM3-209ENST00000565003 HCRTR1O43613 425 aa9.7□□□□□ -0.86
CMTM3-209ENST00000565003 DNAJB5O75953 348 aa9.7□□□□□ -0.86
CMTM3-209ENST00000565003 RECKO95980 971 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms