RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 MIB2Q96AX9 1013 aa17.96■□□□□ 0.47
CLN6-204ENST00000564752 LRFN5Q96NI6 719 aa17.96■□□□□ 0.47
CLN6-204ENST00000564752 C1GALT1Q9NS00 363 aa17.96■□□□□ 0.47
CLN6-204ENST00000564752 SOHLH2Q9NX45 425 aa17.96■□□□□ 0.47
CLN6-204ENST00000564752 POMT2Q9UKY4 750 aa17.96■□□□□ 0.47
CLN6-204ENST00000564752 PLAAQ9Y263 795 aa17.96■□□□□ 0.47
CLN6-204ENST00000564752 PIKFYVEQ9Y2I7 2098 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 SLC9B1P1A6NJY1 282 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 MATN2O00339 956 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 CEP104O60308 925 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 DNAJB5O75953 348 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 PDGFAP04085 211 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 CDH3P22223 829 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 IZUMO3Q5VZ72 239 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 DRICH1Q6PGQ1 229 aaPredicted RBP17.95■□□□□ 0.46
CLN6-204ENST00000564752 GSTA5Q7RTV2 222 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 MR1Q95460 341 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLN6-204ENST00000564752 FERD3LQ96RJ6 166 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 TRIM55Q9BYV6 548 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 OR52A5Q9H2C5 316 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 SRMSQ9H3Y6 488 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 COG4Q9H9E3 785 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 GRPEL1Q9HAV7 217 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 ANKMY1Q9P2S6 941 aa17.95■□□□□ 0.46
CLN6-204ENST00000564752 KLK3P07288 261 aaPredicted RBP17.94■□□□□ 0.46
CLN6-204ENST00000564752 ZSCAN5DPP0CG00 497 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 PRDX3P30048 256 aaKnown RBP17.94■□□□□ 0.46
CLN6-204ENST00000564752 CXCR5P32302 372 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 RPL22P35268 128 aaKnown RBP17.94■□□□□ 0.46
CLN6-204ENST00000564752 GRIA1P42261 906 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 CD151P48509 253 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 CD97P48960 835 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 IL10RAQ13651 578 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 DBN1Q16643 649 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 PLEKHS1Q5SXH7 462 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 PRAMEF17Q5VTA0 474 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 PIANPQ8IYJ0 282 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 CPT1BQ92523 772 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 RANBP9Q96S59 729 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 CHST8Q9H2A9 424 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 TFB2MQ9H5Q4 396 aaKnown RBP17.94■□□□□ 0.46
CLN6-204ENST00000564752 SYTL2Q9HCH5 934 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 CASS4Q9NQ75 786 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 SMARCAL1Q9NZC9 954 aa17.94■□□□□ 0.46
CLN6-204ENST00000564752 CCDC162PA2VCL2 907 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 OR51F1A6NGY5 319 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 MEN1O00255 615 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 IFRD1O00458 451 aaPredicted RBP17.93■□□□□ 0.46
CLN6-204ENST00000564752 BTN3A3O00478 584 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 RAB40ALP0C0E4 278 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 MSL3P1P0C860 447 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 PSMA3P25788 255 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 PDHA2P29803 388 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 FOXN2P32314 431 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 MLLT10P55197 1068 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 BASP1P80723 227 aaKnown RBP17.93■□□□□ 0.46
CLN6-204ENST00000564752 ITIH4Q14624 930 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 TSTD2Q5T7W7 516 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 LCN10Q6JVE6 187 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 AFTPHQ6ULP2 937 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 C4orf22Q6V702 233 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 DSELQ8IZU8 1212 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 CLDN19Q8N6F1 224 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 PHC3Q8NDX5 983 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 NRTNQ99748 197 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 PITPNM3Q9BZ71 974 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 MVB12BQ9H7P6 319 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 FANCEQ9HB96 536 aa17.93■□□□□ 0.46
CLN6-204ENST00000564752 EIF2B3Q9NR50 452 aaKnown RBP17.93■□□□□ 0.46
CLN6-204ENST00000564752 DRG1Q9Y295 367 aaKnown RBP17.93■□□□□ 0.46
CLN6-204ENST00000564752 GSAPA4D1B5 854 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 QSOX1O00391 747 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 BTN3A1O00481 513 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 AP2A2O94973 939 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 GSTM1P09488 218 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 ADRA1DP25100 572 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 RORAP35398 523 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 NSG1P42857 185 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 PREPP48147 710 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 GSTM4Q03013 218 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 ABRQ12979 859 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 RPA4Q13156 261 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 ZNF789Q5FWF6 425 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 CPZQ66K79 652 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 ZNF449Q6P9G9 518 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 PPHLN1Q8NEY8 458 aaKnown RBP17.92■□□□□ 0.46
CLN6-204ENST00000564752 OR52E1Q8NGJ3 308 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 OR13J1Q8NGT2 312 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 OR1L3Q8NH93 324 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 ADAMTS17Q8TE56 1095 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 ING2Q9H160 280 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 MLXIPLQ9NP71 852 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 HOMER3Q9NSC5 361 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 SLC2A6Q9UGQ3 507 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 RIMKLBQ9ULI2 386 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 TCAF1Q9Y4C2 921 aa17.92■□□□□ 0.46
CLN6-204ENST00000564752 PCDHGA9Q9Y5G4 932 aaKnown RBP17.92■□□□□ 0.46
CLN6-204ENST00000564752 ARGFXA6NJG6 315 aa17.91■□□□□ 0.46
CLN6-204ENST00000564752 TMEM150CB9EJG8 249 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms