RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PSMD12O00232 456 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EIF3FO00303 357 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PIP5K1BO14986 540 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PDE5AO76074 875 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SLC25A14O95258 325 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ANP32DO95626 131 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 DNTTP04053 509 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 C1SP09871 688 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 OR56A5P0C7T3 313 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CBSLP0DN79 551 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ENO3P13929 434 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 LBPP18428 481 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ITGB6P18564 788 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GNAZP19086 355 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 LHCGRP22888 699 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 HOXA6P31267 233 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 AKT1P31749 480 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CBSP35520 551 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 VHLP40337 213 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ARL1P40616 181 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 NSG1P42857 185 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ACADVLP49748 655 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CCNG1P51959 295 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SESN3P58005 492 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 DCDC1P59894 354 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 AP2B1P63010 937 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SH3BP2P78314 561 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SLC34A1Q06495 639 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ENPP2Q13822 863 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SIM2Q14190 667 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PUM1Q14671 1186 aaKnown RBP eCLIP7.29□□□□□ -1.248e-8■■■□□ 15.5
MAP1LC3B-205ENST00000564638 PCBP2Q15366 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 KIF19Q2TAC6 998 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 POM121L1PQ3SYA9 428 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MMEL1Q495T6 779 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 USP39Q53GS9 565 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 AGKQ53H12 422 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 C9orf64Q5T6V5 341 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ZNF776Q68DI1 518 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PGM2L1Q6PCE3 622 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 AAGABQ6PD74 315 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GK5Q6ZS86 529 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FAM124AQ86V42 546 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MYLK4Q86YV6 388 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MMAAQ8IVH4 418 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 HOMEZQ8IX15 550 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 KIAA2013Q8IYS2 634 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FBXW8Q8N3Y1 598 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FAM160A2Q8N612 972 aaPredicted RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PPFIBP2Q8ND30 876 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 GPR26Q8NDV2 337 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 OR2A12Q8NGT7 310 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 LKAAEAR1Q8TD35 194 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FRS2Q8WU20 508 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 UBTD2Q8WUN7 234 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CCDC124Q96CT7 223 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 LRIG1Q96JA1 1093 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SPACA7Q96KW9 195 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MRGPRX1Q96LB2 322 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ZNF382Q96SR6 550 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EGFL8Q99944 293 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TACO1Q9BSH4 297 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 HGH1Q9BTY7 390 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SLC25A23Q9BV35 468 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MRPL1Q9BYD6 325 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MKRN2Q9H000 416 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 WDR41Q9HAD4 459 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EFCAB1Q9HAE3 211 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FBRSQ9HAH7 460 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CD93Q9NPY3 652 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MRPL40Q9NQ50 206 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SPATS2LQ9NUQ6 558 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RIC8BQ9NVN3 520 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 WWOXQ9NZC7 414 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 KLHL42Q9P2K6 505 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 STX18Q9P2W9 335 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EBF1Q9UH73 591 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 EIF2B4Q9UI10 523 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 TSR3Q9UJK0 312 aaKnown RBP7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 RAB23Q9ULC3 237 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 DNAJC15Q9Y5T4 150 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PRSS21Q9Y6M0 314 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 PLXND1Q9Y4D7 1925 aa7.29□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FREM2Q5SZK8 3169 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 AGAP14A8MT82 685 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 BBIP1A8MTZ0 92 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MRASO14807 208 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 MID1O15344 667 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 NVLO15381 856 aaKnown RBP7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 FFAR2O15552 330 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 HRO43593 1189 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 ESRRBO95718 433 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 SNRPB2P08579 225 aaKnown RBP7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 UROSP10746 265 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 IDO1P14902 403 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 VCLP18206 1134 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 UGT1A6P19224 532 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 BCKDHBP21953 392 aa7.28□□□□□ -1.24
MAP1LC3B-205ENST00000564638 UGT1A1P22309 533 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms