RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 GFYI3L273 518 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 EIF3FO00303 357 aaPredicted RBP12.14□□□□□ -0.47
KARS-204ENST00000564578 DKK1O94907 266 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 SLCO1A2P46721 670 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 SERPINB9P50453 376 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 DUSP3P51452 185 aaPredicted RBP12.14□□□□□ -0.47
KARS-204ENST00000564578 IL2P60568 153 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 PRKG2Q13237 762 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 GRB7Q14451 532 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 CCSMST1Q4G0I0 132 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 TMEM26Q6ZUK4 368 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 TRIM48Q8IWZ4 208 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 TBC1D21Q8IYX1 336 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 SPATA6LQ8N4H0 392 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 EPS8L3Q8TE67 593 aaKnown RBP12.14□□□□□ -0.47
KARS-204ENST00000564578 MZB1Q8WU39 189 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 SKA2Q8WVK7 121 aaPredicted RBP12.14□□□□□ -0.47
KARS-204ENST00000564578 NAT6Q93015 286 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 ISL2Q96A47 359 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 LINGO1Q96FE5 620 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 FERD3LQ96RJ6 166 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 CCDC3Q9BQI4 270 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 CCDC77Q9BR77 488 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 TBC1D10AQ9BXI6 508 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.14□□□□□ -0.47
KARS-204ENST00000564578 KNTC1P50748 2209 aa12.14□□□□□ -0.47
KARS-204ENST00000564578 A0A1W2PQM1 296 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 RHPN2P1A8MT19 583 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 PSIP1O75475 530 aaKnown RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 KCNK5O95279 499 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 C1orf105O95561 183 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 GP1BAP07359 652 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 MPC1LP0DKB6 136 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 SDHBP21912 280 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 CNTFP26441 200 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 ALDH4A1P30038 563 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 MAGEA12P43365 314 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 GPR3P46089 330 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 SLC12A2P55011 1212 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 OR1D5P58170 312 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 SIM1P81133 766 aaPredicted RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 RASA2Q15283 850 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 UNC5DQ6UXZ4 953 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 SPRED1Q7Z699 444 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 TDRPQ86YL5 185 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 CYP4X1Q8N118 509 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 ZFPM2Q8WW38 1151 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 TSPAN17Q96FV3 270 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 MENTQ9BUN1 341 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 MVB12BQ9H7P6 319 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 UCK1Q9HA47 277 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 SNX15Q9NRS6 342 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 TBK1Q9UHD2 729 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 ADAMTS6Q9UKP5 1117 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 HEBP2Q9Y5Z4 205 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 COLEC10Q9Y6Z7 277 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 ARHGEF33A8MVX0 844 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 TRIM49D1C9J1S8 452 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 RFPL1O75677 317 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 KRT38O76015 456 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 C2P06681 752 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 SNRPAP09012 282 aaKnown RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 NDUFS1P28331 727 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 RGS4P49798 205 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 CFHR1Q03591 330 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 DLG1Q12959 904 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 EGFL6Q8IUX8 553 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 RBM12BQ8IXT5 1001 aaKnown RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 Q8N9G6 341 aaPredicted RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 AVL9Q8NBF6 648 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 OR52E1Q8NGJ3 308 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 HGH1Q9BTY7 390 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 SYTL2Q9HCH5 934 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
KARS-204ENST00000564578 CIDEBQ9UHD4 219 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 PLAAQ9Y263 795 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 PCDHGA1Q9Y5H4 931 aa12.13□□□□□ -0.47
KARS-204ENST00000564578 ASPMQ8IZT6 3477 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 IGHV1OR21-1A0A087WYE8 117 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 LILRA5A6NI73 299 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 ERLIN1O75477 346 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 KRT37O76014 449 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 CCDC166P0CW27 439 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 H2AFXP16104 143 aaPredicted RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 CD1CP29017 333 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 CRABP2P29373 138 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 TYK2P29597 1187 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 ILKQ13418 452 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 BIRC2Q13490 618 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 NKAIN2Q5VXU1 208 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 TIFABQ6ZNK6 161 aa12.12□□□□□ -0.47
KARS-204ENST00000564578 CENPLQ8N0S6 344 aaPredicted RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 NKAPQ8N5F7 415 aaKnown RBP12.12□□□□□ -0.47
KARS-204ENST00000564578 SH3KBP1Q96B97 665 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms