RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 MFAP3LO75121 409 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDR2-204ENST00000564542 CBX6O95503 412 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 IGHEP01854 428 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 APOC2P02655 101 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 TPM1P09493 284 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 RBL1P28749 1068 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 MARCKSL1P49006 195 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 HADHBP55084 474 aaKnown RBP13.64□□□□□ -0.23
CDR2-204ENST00000564542 RPA4Q13156 261 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 MSLNQ13421 630 aaPredicted RBP13.64□□□□□ -0.23
CDR2-204ENST00000564542 OLIG2Q13516 323 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 BOP1Q14137 746 aaKnown RBP13.64□□□□□ -0.23
CDR2-204ENST00000564542 SSPNQ14714 243 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 MYBPC3Q14896 1274 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 PLEKHN1Q494U1 663 aaPredicted RBP13.64□□□□□ -0.23
CDR2-204ENST00000564542 DCAF10Q5QP82 559 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 ZNF787Q6DD87 383 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 SPESP1Q6UW49 350 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 IGFL3Q6UXB1 125 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 BBS12Q6ZW61 710 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 RCOR2Q8IZ40 523 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 ADGRF3Q8IZF5 1079 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 CLEC1AQ8NC01 280 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 N4BP2L2Q92802 583 aaPredicted RBP13.64□□□□□ -0.23
CDR2-204ENST00000564542 NRTNQ99748 197 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 APOL2Q9BQE5 337 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 HGH1Q9BTY7 390 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 GOLPH3Q9H4A6 298 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 ASF1BQ9NVP2 202 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 AAR2Q9Y312 384 aaKnown RBP13.64□□□□□ -0.23
CDR2-204ENST00000564542 ALG6Q9Y672 507 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 AP1M2Q9Y6Q5 423 aa13.64□□□□□ -0.23
CDR2-204ENST00000564542 PCM1Q15154 2024 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 H3BMH7 237 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 H7C0C1 242 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 CBFA2T2O43439 604 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 OR2B3O76000 313 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 PSMB4P28070 264 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 DCTP40126 519 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 FOLR3P41439 243 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 ATP5OP48047 213 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 TMPRSS15P98073 1019 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 GPR33Q49SQ1 333 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 ZRANB3Q5FWF4 1079 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 LYPLAL1Q5VWZ2 237 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 RHBDD2Q6NTF9 364 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 ZNF449Q6P9G9 518 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 GALNT16Q8N428 558 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 C19orf47Q8N9M1 422 aaKnown RBP13.63□□□□□ -0.23
CDR2-204ENST00000564542 PHC3Q8NDX5 983 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 PROKR1Q8TCW9 393 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 TFGQ92734 400 aaPredicted RBP13.63□□□□□ -0.23
CDR2-204ENST00000564542 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDR2-204ENST00000564542 C5orf34Q96MH7 638 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 FERMT1Q9BQL6 677 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 ILKAPQ9H0C8 392 aaPredicted RBP13.63□□□□□ -0.23
CDR2-204ENST00000564542 FAM96AQ9H5X1 160 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 XKR8Q9H6D3 395 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 C10orf88Q9H8K7 445 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 ZDHHC3Q9NYG2 299 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 GPN3Q9UHW5 284 aaPredicted RBP13.63□□□□□ -0.23
CDR2-204ENST00000564542 ICKQ9UPZ9 632 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 SLC5A6Q9Y289 635 aa13.63□□□□□ -0.23
CDR2-204ENST00000564542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDR2-204ENST00000564542 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 NUP210LQ5VU65 1888 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 TRBV5-4A0A0C4DH59 114 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 PEX12O00623 359 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 CCL22O00626 93 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 LDB2O43679 373 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 IPO13O94829 963 aaKnown RBP13.62□□□□□ -0.23
CDR2-204ENST00000564542 CD63P08962 238 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 GSTM1P09488 218 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 CBSLP0DN79 551 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 ACRV1P26436 265 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 COL8A1P27658 744 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 PDHA2P29803 388 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 MC4RP32245 332 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 SHMT2P34897 504 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 CBSP35520 551 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 GSTM4Q03013 218 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 PRKG2Q13237 762 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 PRPSAP1Q14558 356 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 ANKRD20A2Q5SQ80 823 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 ANKRD20A1Q5TYW2 823 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 ANKRD20A3Q5VUR7 823 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 MLIPQ5VWP3 458 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 CISD2Q8N5K1 135 aaKnown RBP13.62□□□□□ -0.23
CDR2-204ENST00000564542 OR2Y1Q8NGV0 311 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 TM9SF4Q92544 642 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 PPP1R2P1Q96PQ5 205 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 BARD1Q99728 777 aaKnown RBP13.62□□□□□ -0.23
CDR2-204ENST00000564542 HEMGNQ9BXL5 484 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 CHRNA10Q9GZZ6 450 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 FAM60AQ9NP50 221 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 NDOR1Q9UHB4 597 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms