RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 HIST1H2AJQ99878 128 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 H2AFJQ9BTM1 129 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 MVB12BQ9H7P6 319 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 PRDM8Q9NQV8 689 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 FAM53CQ9NYF3 392 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 POLG2Q9UHN1 485 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 ASF1AQ9Y294 204 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 FAM186AA6NE01 2351 aa18.34■□□□□ 0.53
SPNS1-206ENST00000564476 PATE3B3GLJ2 98 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 H3BQF6 201 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 CDC7O00311 574 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 YY2O15391 372 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 PLIN3O60664 434 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 XRCC1P18887 633 aaPredicted RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 EPHA8P29322 1005 aaPredicted RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 GMPRP36959 345 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 CCT8P50990 548 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 ATXN3P54252 364 aaPredicted RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 AP1S2P56377 157 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 PPP2R2AP63151 447 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 SHBQ15464 509 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 TSNQ15631 228 aaKnown RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 RPE65Q16518 533 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 TECRLQ5HYJ1 363 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 N4BP2L1Q5TBK1 243 aaPredicted RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 UBE2R2Q712K3 238 aaPredicted RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 GPSM1Q86YR5 675 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 SPNS2Q8IVW8 549 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 RBM12BQ8IXT5 1001 aaKnown RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 PHC3Q8NDX5 983 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 OR5K2Q8NHB8 316 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 RAD51AP1Q96B01 352 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 PTERQ96BW5 349 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 RMDN2Q96LZ7 410 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 C12orf66Q96MD2 445 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 INSM2Q96T92 566 aaPredicted RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 DUSP23Q9BVJ7 150 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 TRIT1Q9H3H1 467 aaKnown RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 ALG9Q9H6U8 611 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 CNOT10Q9H9A5 744 aaKnown RBP18.33■□□□□ 0.52
SPNS1-206ENST00000564476 ZNF358Q9NW07 568 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 NKIRAS1Q9NYS0 192 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 RNF112Q9ULX5 631 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 PSMD13Q9UNM6 376 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 WDR37Q9Y2I8 494 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 OARD1Q9Y530 152 aa18.33■□□□□ 0.52
SPNS1-206ENST00000564476 ADAMTS9Q9P2N4 1935 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 TMEM120BA0PK00 339 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 TARM1B6A8C7 271 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 PCDHGA12O60330 932 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 C1orf105O95561 183 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 TPBGLP0DKB5 382 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 ENGP17813 658 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 TAC1P20366 129 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 RPA3P35244 121 aaPredicted RBP18.32■□□□□ 0.52
SPNS1-206ENST00000564476 RPIAP49247 311 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 CLCA4Q14CN2 919 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 SUZ12Q15022 739 aaKnown RBP18.32■□□□□ 0.52
SPNS1-206ENST00000564476 SBSNQ6UWP8 590 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 SLC25A45Q8N413 288 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 TMEM151AQ8N4L1 468 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 SPDYE1Q8NFV5 336 aaPredicted RBP18.32■□□□□ 0.52
SPNS1-206ENST00000564476 SAP25Q8TEE9 199 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 DENND1AQ8TEH3 1009 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 ZDHHC1Q8WTX9 485 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 CCDC126Q96EE4 140 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 ATOH8Q96SQ7 321 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 POT1Q9NUX5 634 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 PCDHGB2Q9Y5G2 931 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 CABIN1Q9Y6J0 2220 aa18.32■□□□□ 0.52
SPNS1-206ENST00000564476 PCDH15Q96QU1 1955 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 PROCP04070 461 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 ALPPL2P10696 532 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 MTHFD1P11586 935 aaKnown RBP18.31■□□□□ 0.52
SPNS1-206ENST00000564476 NR1D1P20393 614 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 HSD17B2P37059 387 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 GLRBP48167 497 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 BNIP3Q12983 259 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 KRT33BQ14525 404 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 OR4D1Q15615 310 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 PPP1R3AQ16821 1122 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 FRA10AC1Q70Z53 315 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 KANSL1Q7Z3B3 1105 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 SLC9B2Q86UD5 537 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 DCUN1D3Q8IWE4 304 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 SFRP1Q8N474 314 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 RAB42Q8N4Z0 105 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 CFAP61Q8NHU2 1237 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 CXorf40BQ96DE9 158 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 CCDC138Q96M89 665 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 NLGN3Q9NZ94 848 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 EMCNQ9ULC0 261 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 PDE10AQ9Y233 779 aa18.31■□□□□ 0.52
SPNS1-206ENST00000564476 RIF1Q5UIP0 2472 aaKnown RBP18.3■□□□□ 0.52
SPNS1-206ENST00000564476 NPEPPSL1A6NEC2 478 aa18.3■□□□□ 0.52
SPNS1-206ENST00000564476 SMIM24O75264 130 aa18.3■□□□□ 0.52
SPNS1-206ENST00000564476 TOP3BO95985 862 aaKnown RBP18.3■□□□□ 0.52
SPNS1-206ENST00000564476 S100BP04271 92 aaPredicted RBP18.3■□□□□ 0.52
SPNS1-206ENST00000564476 CELA2BP08218 269 aaPredicted RBP18.3■□□□□ 0.52
SPNS1-206ENST00000564476 ANXA5P08758 320 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms