RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TMEM171Q8WVE6 324 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 TFAP2BQ92481 460 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 AP2M1Q96CW1 435 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 RBMXL1Q96E39 390 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 CELF6Q96J87 481 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 PSD3Q9NYI0 1048 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 POMT2Q9UKY4 750 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 VPS9D1Q9Y2B5 631 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 PCDHGB1Q9Y5G3 927 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 ADGRG1Q9Y653 693 aa10.11□□□□□ -0.79
HDGFL3-204ENST00000563790 CSMD3Q7Z407 3707 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 NUAK1O60285 661 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 SRGAP2O75044 1071 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 HNF1AP20823 631 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 TNFAIP3P21580 790 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 LHCGRP22888 699 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 RPL10P27635 214 aaKnown RBP10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 VIPR1P32241 457 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 IDUAP35475 653 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 CD96P40200 585 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 OCRLQ01968 901 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 RABEP1Q15276 862 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 TAF5Q15542 800 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 VASNQ6EMK4 673 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 SPINK14Q6IE38 97 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 CNNM4Q6P4Q7 775 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 CDHR3Q6ZTQ4 885 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 PLEKHM3Q6ZWE6 761 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 DEFB106AQ8N104 65 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 BEST3Q8N1M1 668 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 POGLUT1Q8NBL1 392 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 SEMA6DQ8NFY4 1073 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 GPT2Q8TD30 523 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 SCAMP4Q969E2 229 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 ABCG8Q9H221 673 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 WDCPQ9H6R7 721 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 KBTBD4Q9NVX7 518 aa10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 ING1Q9UK53 422 aaPredicted RBP10.1□□□□□ -0.79
HDGFL3-204ENST00000563790 PRR14LQ5THK1 2151 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 A0A096LNT2 108 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 GSAPA4D1B5 854 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 QSOX1O00391 747 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 DVL2O14641 736 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 ZSCAN9O15535 394 aaPredicted RBP10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 MAP3K7O43318 606 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 ST6GAL1P15907 406 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 BMP5P22003 454 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 ACADSBP45954 432 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 CARSP49589 748 aaKnown RBP10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 CYTH1Q15438 398 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 CNGA2Q16280 664 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 ATP13A4Q4VNC1 1196 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 AWAT1Q58HT5 328 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 ARMC6Q6NXE6 501 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 RFLNAQ6ZTI6 216 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 COX15Q7KZN9 410 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 MED15Q96RN5 788 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 ZSWIM1Q9BR11 485 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 UTP23Q9BRU9 249 aaKnown RBP10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 CRB3Q9BUF7 120 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 PANK2Q9BZ23 570 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 CARD9Q9H257 536 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 PIGVQ9NUD9 493 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 RIC8BQ9NVN3 520 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 PPARGC1AQ9UBK2 798 aaKnown RBP10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 SLC23A2Q9UGH3 650 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 CD84Q9UIB8 345 aa10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 CNOT6Q9ULM6 557 aaKnown RBP10.09□□□□□ -0.79
HDGFL3-204ENST00000563790 A0A0A6YYJ9 748 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 SH3D21A4FU49 640 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 VSTM2BA6NLU5 285 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 SLCO1B7G3V0H7 640 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 TRAFD1O14545 582 aaPredicted RBP10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 NEURL1O76050 574 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 PIM1P11309 404 aaPredicted RBP10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 MAPKAPK2P49137 400 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 SLC25A25Q6KCM7 469 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 ZNF585AQ6P3V2 769 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 BTLAQ7Z6A9 289 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 CCDC65Q8IXS2 484 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 ISL2Q96A47 359 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 FN3KRPQ9HA64 309 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 CTSFQ9UBX1 484 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 CCDC39Q9UFE4 941 aa10.08□□□□□ -0.8
HDGFL3-204ENST00000563790 IGHV1-45A0A0A0MS14 117 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 OR6C74A6NCV1 312 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 HSPB2A8KAH6 182 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 NPIPA2E9PIF3 369 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 NPIPA3F8WFD2 350 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 TGFBR3LH3BV60 316 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 PIN1P1O15428 100 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 SIAH2O43255 324 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 HS6ST1O60243 411 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 NME2P1O60361 137 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 NME2P22392 152 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 STAT6P42226 847 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 CSNK1DP48730 415 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 DCDC1P59894 354 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 TMPRSS15P98073 1019 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms