RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ANKMY1Q9P2S6 941 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 PCDHB1Q9Y5F3 818 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 DNAJC15Q9Y5T4 150 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 TMEM88BA6NKF7 163 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 TARM1B6A8C7 271 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 FAM47E-STBD1D6RA91 191 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 NEDD8-MDP1E9PL57 170 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 TPD52L2O43399 206 aaKnown RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 DNAJB5O75953 348 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 RECQL5O94762 991 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 CD1DP15813 335 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 HPCAL1P37235 193 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 YAP1P46937 504 aaKnown RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 GSK3BP49841 420 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 CYP4F8P98187 520 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 CRTC3Q6UUV7 619 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 RRM2BQ7LG56 351 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 ANKRD13BQ86YJ7 626 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 KIAA1191Q96A73 305 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 C11orf84Q9BUA3 381 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 NDEL1Q9GZM8 345 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 MOV10Q9HCE1 1003 aaKnown RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 CSNK1G1Q9HCP0 422 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 KIAA0100Q14667 2235 aaKnown RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 LCHNA4D1U4 455 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 SLC28A1O00337 649 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 ARPC2O15144 300 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 MTX2O75431 263 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 EPN2O95208 641 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 CLDN7O95471 211 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 GSTM2P28161 218 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 SERPINB1P30740 379 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 CDKN1CP49918 316 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 ERVK-8P63133 956 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 CAMK2GQ13555 558 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 RTP2Q5QGT7 225 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 OTUD1Q5VV17 481 aaPredicted RBP10.27□□□□□ -0.77
RNF40-204ENST00000563683 SAPCD2Q86UD0 394 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 MINDY1Q8N5J2 469 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 ZBTB2Q8N680 514 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 MAGEL2Q9UJ55 1249 aa10.27□□□□□ -0.77
RNF40-204ENST00000563683 ILVBLA1L0T0 632 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 G3V2T6 193 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 M0QZQ0 153 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 MAPK8P45983 427 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 SKIV2LQ15477 1246 aaKnown RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 OR4D1Q15615 310 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 USP51Q70EK9 711 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 GALNT5Q7Z7M9 940 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ZCCHC7Q8N3Z6 543 aaKnown RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 LIX1Q8N485 282 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 KATNBL1Q9H079 304 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 OSGEPL1Q9H4B0 414 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 EHD1Q9H4M9 534 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 FNIP2Q9P278 1114 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 DYRK1BQ9Y463 629 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ACOX3O15254 700 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 AOC2O75106 756 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 CATP04040 527 aaKnown RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 CYP11A1P05108 521 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 POLR2EP19388 210 aaKnown RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 RFC2P35250 354 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 PGFP49763 221 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 SIM2Q14190 667 aaPredicted RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 SETMARQ53H47 684 aaPredicted RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 PSAPL1Q6NUJ1 521 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 CHST15Q7LFX5 561 aaPredicted RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 PROSER1Q86XN7 944 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ADGRG5Q8IZF4 528 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 SLC7A5P1Q8MH63 180 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ARL10Q8N8L6 244 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 OR10Q1Q8NGQ4 319 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 RORBQ92753 470 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 PTERQ96BW5 349 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ACAT2Q9BWD1 397 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 LHPPQ9H008 270 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 MIEF1Q9NQG6 463 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ASAH2Q9NR71 780 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 IGSF5Q9NSI5 407 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ABCD2Q9UBJ2 740 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 HCSTQ9UBK5 93 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 C3orf18Q9UK00 162 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 IFT52Q9Y366 437 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 NME4O00746 187 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 EPOP01588 193 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 IDUAP35475 653 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 SPAM1P38567 509 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 CRATP43155 626 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ADARB1P78563 741 aaKnown RBP10.26□□□□□ -0.77
RNF40-204ENST00000563683 PWP1Q13610 501 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ZNF697Q5TEC3 545 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 DOK6Q6PKX4 331 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 HMGCLL1Q8TB92 370 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ZNF599Q96NL3 588 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 PSKH2Q96QS6 385 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 MCMBPQ9BTE3 642 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 OSER1Q9NX31 292 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms