RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CMKLR1Q99788 373 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 NSMCE4AQ9NXX6 385 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 AKAP7Q9P0M2 348 aaPredicted RBP16.26■□□□□ 0.19
CLK3-207ENST00000562389 MTRF1LQ9UGC7 380 aaKnown RBP16.26■□□□□ 0.19
CLK3-207ENST00000562389 LOXL2Q9Y4K0 774 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 AK5Q9Y6K8 562 aa16.26■□□□□ 0.19
CLK3-207ENST00000562389 TOX3O15405 576 aaPredicted RBP16.25■□□□□ 0.19
CLK3-207ENST00000562389 KDM1AO60341 852 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 VPS26AO75436 327 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 CD9P21926 228 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 MLLT3P42568 568 aaPredicted RBP16.25■□□□□ 0.19
CLK3-207ENST00000562389 GPX6P59796 221 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 PRKG2Q13237 762 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 CAPN12Q6ZSI9 719 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 NEK10Q6ZWH5 1172 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 PRSS42Q7Z5A4 293 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 DCUN1D3Q8IWE4 304 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 LSMEM2Q8N112 164 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 FBXO39Q8N4B4 442 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 SIDT2Q8NBJ9 832 aaKnown RBP16.25■□□□□ 0.19
CLK3-207ENST00000562389 OR4E2Q8NGC2 313 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 MDM1Q8TC05 714 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 CD200R1Q8TD46 325 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 C9orf72Q96LT7 481 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 TGM7Q96PF1 710 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 GPR21Q99679 349 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 SLC30A3Q99726 388 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 SRMSQ9H3Y6 488 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 CCDC86Q9H6F5 360 aaKnown RBP16.25■□□□□ 0.19
CLK3-207ENST00000562389 DHRS7Q9Y394 339 aa16.25■□□□□ 0.19
CLK3-207ENST00000562389 ADAMTS20P59510 1910 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 TCRBV9S1A1TA0A576 114 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 PMS2P1A4D2B8 440 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 OR6C74A6NCV1 312 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 MATN2O00339 956 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 BRINP1O60477 761 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 SPAG6O75602 509 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 ECHS1P30084 290 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 CYP4F3Q08477 520 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 ILF2Q12905 390 aaKnown RBP16.24■□□□□ 0.19
CLK3-207ENST00000562389 ABRQ12979 859 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 CUL1Q13616 776 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 ACSBG2Q5FVE4 666 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 SNAP47Q5SQN1 464 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 RBM20Q5T481 1227 aaKnown RBP16.24■□□□□ 0.19
CLK3-207ENST00000562389 UGT3A1Q6NUS8 523 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 IRGCQ6NXR0 463 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 C3orf62Q6ZUJ4 267 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 AMIGO1Q86WK6 493 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 RELL1Q8IUW5 271 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 KDF1Q8NAX2 398 aaPredicted RBP16.24■□□□□ 0.19
CLK3-207ENST00000562389 AGBL5Q8NDL9 886 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 CFAP61Q8NHU2 1237 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 IFT81Q8WYA0 676 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 CDKL2Q92772 493 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 INPP5DQ92835 1189 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 FOPNLQ96NB1 174 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 CNTNAP3BQ96NU0 1288 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 CD180Q99467 661 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 FMO2Q99518 471 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 NDNQ99608 321 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 CNTNAP3Q9BZ76 1288 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 TSPYL1Q9H0U9 437 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 LRRC4CQ9HCJ2 640 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 SMYD2Q9NRG4 433 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 HRASLS2Q9NWW9 162 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 TAS2R13Q9NYV9 303 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 SEMA5BQ9P283 1151 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 KLHL3Q9UH77 587 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 ICKQ9UPZ9 632 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 TDRKHQ9Y2W6 561 aaKnown RBP16.24■□□□□ 0.19
CLK3-207ENST00000562389 PSAT1Q9Y617 370 aa16.24■□□□□ 0.19
CLK3-207ENST00000562389 FAM159BA6NKW6 160 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 A8MU76 341 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 ESPNB1AK53 854 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 EIF3FO00303 357 aaPredicted RBP16.23■□□□□ 0.19
CLK3-207ENST00000562389 MATN4O95460 622 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 C1orf105O95561 183 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 C1QAP02745 245 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 ITGA2BP08514 1039 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 JMJD7P0C870 316 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 MPC1LP0DKB6 136 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 CBSLP0DN79 551 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 ENO3P13929 434 aaPredicted RBP16.23■□□□□ 0.19
CLK3-207ENST00000562389 HGFP14210 728 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 CSTF2P33240 577 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLK3-207ENST00000562389 SHMT2P34897 504 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 CBSP35520 551 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 SKIV2L2P42285 1042 aaKnown RBP16.23■□□□□ 0.19
CLK3-207ENST00000562389 ABCG1P45844 678 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 PPP1CAP62136 330 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 TIAL1Q01085 375 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLK3-207ENST00000562389 PRKAA1Q13131 559 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 KYNUQ16719 465 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 KLHL38Q2WGJ6 581 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 DNTTIP2Q5QJE6 756 aaKnown RBP16.23■□□□□ 0.19
CLK3-207ENST00000562389 FAM45BPQ6NSW5 357 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 ARMC6Q6NXE6 501 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 STRA8Q7Z7C7 330 aa16.23■□□□□ 0.19
CLK3-207ENST00000562389 LRRN4CLQ8ND94 238 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms