RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 DACH2Q96NX9 599 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 GCNAQ96QF7 691 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 BAG1Q99933 345 aaPredicted RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 NTPCRQ9BSD7 190 aaKnown RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 CENPOQ9BU64 300 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 AP1M1Q9BXS5 423 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 MRPL44Q9H9J2 332 aaKnown RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 CHMP1AQ9HD42 196 aaPredicted RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 NFKBIL1Q9UBC1 381 aaPredicted RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 ELP1O95163 1332 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 ROBO3Q96MS0 1386 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 COL4A1P02462 1669 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 A0A0U1RQJ8 604 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 LNP1A1A4G5 178 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 LINC01553A4QN01 128 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 J3KR12 359 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 CLGNO14967 610 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 SLC16A5O15375 505 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 PLRG1O43660 514 aaKnown RBP3.66□□□□□ -1.82
HERC1-215ENST00000561436 NDUFS7O75251 213 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 CABYRO75952 493 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 PGM3O95394 542 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 TIMP1P01033 207 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 APOA4P06727 396 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 UBTFL1P0CB47 393 aaPredicted RBP3.66□□□□□ -1.82
HERC1-215ENST00000561436 SRCP12931 536 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 MMP9P14780 707 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 ITGB6P18564 788 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 CCND3P30281 292 aaPredicted RBP3.66□□□□□ -1.82
HERC1-215ENST00000561436 TAS2R38P59533 333 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 MECOMQ03112 1051 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 COG2Q14746 738 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 EFNB3Q15768 340 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 IGSF11Q5DX21 431 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 C9orf152Q5JTZ5 239 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 KCNT1Q5JUK3 1230 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 ZDHHC20Q5W0Z9 365 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 DHRS7BQ6IAN0 325 aaPredicted RBP3.66□□□□□ -1.82
HERC1-215ENST00000561436 KRT80Q6KB66 452 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 ZNF280DQ6N043 979 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 WDR73Q6P4I2 378 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 PSRC1Q6PGN9 363 aaPredicted RBP3.66□□□□□ -1.82
HERC1-215ENST00000561436 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.66□□□□□ -1.82
HERC1-215ENST00000561436 LINC00346Q8IVM7 164 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 FBXL14Q8N1E6 418 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 SCML4Q8N228 414 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 PCDH20Q8N6Y1 951 aaKnown RBP3.66□□□□□ -1.82
HERC1-215ENST00000561436 EMC1Q8N766 993 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 PRR26Q8N8Z3 221 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 GSDMBQ8TAX9 411 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 ARHGAP45Q92619 1136 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 ZNF653Q96CK0 615 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 PPP1R13BQ96KQ4 1090 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 EGLN2Q96KS0 407 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 QRFPRQ96P65 431 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 SMC6Q96SB8 1091 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 FIZ1Q96SL8 496 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 PAFAH2Q99487 392 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 SEMA3CQ99985 751 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 KLHL4Q9C0H6 718 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 MMP27Q9H306 513 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 RAD21L1Q9H4I0 556 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 MMP25Q9NPA2 562 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 MCM9Q9NXL9 1143 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 THEGQ9P2T0 379 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 WNT16Q9UBV4 365 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 DNAJB4Q9UDY4 337 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 AMACRQ9UHK6 382 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 FBXL2Q9UKC9 423 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 ZNF148Q9UQR1 794 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 SNX9Q9Y5X1 595 aa3.66□□□□□ -1.82
HERC1-215ENST00000561436 A0A0C4DFX4 3053 aa3.65□□□□□ -1.82
HERC1-215ENST00000561436 PKD1L2Q7Z442 2459 aa3.65□□□□□ -1.82
HERC1-215ENST00000561436 KRTAP29-1A8MX34 341 aaPredicted RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 SOCS6O14544 535 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 INSIG1O15503 277 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 KCNN4O15554 427 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 PAPSS1O43252 624 aaPredicted RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 ADAM20O43506 726 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 ZNF500O60304 480 aaPredicted RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 IGHV4-30-4P0DP06 118 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 PLA2G2AP14555 144 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 SP100P23497 879 aaPredicted RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 PCYT1AP49585 367 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 PSMC6P62333 389 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 SIRPAP78324 504 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 ABATP80404 500 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 EGR4Q05215 589 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 CRYZQ08257 329 aaKnown RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 DECR1Q16698 335 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 MEP1AQ16819 746 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 XKR9Q5GH70 373 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 RUSC1-AS1Q66K80 236 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 PAPD4Q6PIY7 484 aaKnown RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 C9orf47Q6ZRZ4 202 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 TPRG1Q6ZUI0 275 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 ADHFE1Q8IWW8 467 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 KCTD6Q8NC69 237 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 TSPAN14Q8NG11 270 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 THAP6Q8TBB0 222 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms