RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 FOPNLQ96NB1 174 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 RTKNQ9BST9 563 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 STN1Q9H668 368 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 MVB12BQ9H7P6 319 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 POPDC3Q9HBV1 291 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 POT1Q9NUX5 634 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 RUVBL2Q9Y230 463 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 PLAAQ9Y263 795 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 PCM1Q15154 2024 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 IQANK1A0A1B0GTG1 560 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 DCDC2BA2VCK2 349 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 SMIM23A6NLE4 172 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TRIM49D1C9J1S8 452 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 GFYI3L273 518 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 RASGRF2O14827 1237 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 GIPC1O14908 333 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 B4GAT1O43505 415 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ZBTB14O43829 449 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TCEA3O75764 348 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 WISP3O95389 354 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TSPAN12O95859 305 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ALDOAP04075 364 aaKnown RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 C2P06681 752 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 SLC35E2BP0CK96 405 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 CCDC166P0CW27 439 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ZNF37AP17032 561 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 NDUFS1P28331 727 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 CRABP2P29373 138 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 GMPRP36959 345 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 GPR3P46089 330 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 GPR18Q14330 331 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ZKSCAN8Q15776 578 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 PPM1JQ5JR12 505 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 LRRC8EQ6NSJ5 796 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TTC23LQ6PF05 361 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TMEM26Q6ZUK4 368 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 PIWIL4Q7Z3Z4 852 aaKnown RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ZNF438Q7Z4V0 828 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 SLCO6A1Q86UG4 719 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 RBM12BQ8IXT5 1001 aaKnown RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 CYP4X1Q8N118 509 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 MYO1HQ8N1T3 1032 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 SPATA6LQ8N4H0 392 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 Q8N9G6 341 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 OR5K2Q8NHB8 316 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ASB11Q8WXH4 323 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 NAT6Q93015 286 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 CCDC74AQ96AQ1 378 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 LINGO1Q96FE5 620 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 UBXN10Q96LJ8 280 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 SLC38A3Q99624 504 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 CCDC3Q9BQI4 270 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ROPN1BQ9BZX4 212 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ABCG4Q9H172 646 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TRIT1Q9H3H1 467 aaKnown RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 PPCSQ9HAB8 311 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ROPN1Q9HAT0 212 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 SNX15Q9NRS6 342 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 PSMC3IPQ9P2W1 217 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 CTNNAL1Q9UBT7 734 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 POLG2Q9UHN1 485 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TLK1Q9UKI8 766 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 TDRKHQ9Y2W6 561 aaKnown RBP10.01□□□□□ -0.81
LRRC28-221ENST00000561276 ACOT9Q9Y305 439 aa10.01□□□□□ -0.81
LRRC28-221ENST00000561276 A0A096LPK6 155 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 SPAARA0A1B0GVQ0 90 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 CASC3O15234 703 aaKnown RBP10□□□□□ -0.81
LRRC28-221ENST00000561276 ZW10O43264 779 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 CDH16O75309 829 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 PSIP1O75475 530 aaKnown RBP10□□□□□ -0.81
LRRC28-221ENST00000561276 KCNK5O95279 499 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 C1orf105O95561 183 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 RPN2P04844 631 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 GP1BAP07359 652 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 TPBGLP0DKB5 382 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 MAPK9P45984 424 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 ACADVLP49748 655 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 CSRP3P50461 194 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 NOVA1P51513 510 aaKnown RBP10□□□□□ -0.81
LRRC28-221ENST00000561276 OR1D5P58170 312 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 CCL7P80098 99 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 NR1D2Q14995 579 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 RASA2Q15283 850 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 CCDC157Q569K6 752 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 TIFABQ6ZNK6 161 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 UBE2R2Q712K3 238 aaPredicted RBP10□□□□□ -0.81
LRRC28-221ENST00000561276 TDRPQ86YL5 185 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 OR4E2Q8NGC2 313 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 MAGEC3Q8TD91 643 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 JPH3Q8WXH2 748 aaPredicted RBP10□□□□□ -0.81
LRRC28-221ENST00000561276 ANKRD7Q92527 254 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 RAD51AP1Q96B01 352 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 MTBPQ96DY7 904 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 ZIM3Q96PE6 472 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 NRTNQ99748 197 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 TBC1D10AQ9BXI6 508 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 TFB2MQ9H5Q4 396 aaKnown RBP10□□□□□ -0.81
LRRC28-221ENST00000561276 KIR3DX1Q9H7L2 352 aa10□□□□□ -0.81
LRRC28-221ENST00000561276 UCK1Q9HA47 277 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms