RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MAGEC3Q8TD91 643 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 ERLEC1Q96DZ1 483 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 EFCAB1Q9HAE3 211 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 SDR39U1Q9NRG7 319 aaPredicted RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 A0A1W2PPC1 479 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 ARHGEF33A8MVX0 844 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 CHUKO15111 745 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 PLRG1O43660 514 aaKnown RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 RNASEH2AO75792 299 aaKnown RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 CATP04040 527 aaKnown RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 IDO1P14902 403 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 ZNF8P17098 575 aaPredicted RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 IGFBP4P22692 258 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 PREPP48147 710 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 NUDT2P50583 147 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 MRPS21P82921 87 aaKnown RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 PON2Q15165 354 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 PTCHD3Q3KNS1 767 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 GGTA1PQ4G0N0 100 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 TCHHL1Q5QJ38 904 aaPredicted RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 C11orf96Q7Z7L8 435 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 TRAPPC5Q8IUR0 188 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 LILRA3Q8N6C8 439 aaPredicted RBP12.6□□□□□ -0.39
SNX1-211ENST00000560829 DCBLD1Q8N8Z6 715 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 OR2T11Q8NH01 316 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 RCN3Q96D15 328 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 CCDC138Q96M89 665 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 C1QTNF2Q9BXJ5 285 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 SLC29A3Q9BZD2 475 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 KCNK12Q9HB15 430 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 TMEM45AQ9NWC5 275 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 GIMAP2Q9UG22 337 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 SLC7A8Q9UHI5 535 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 COL4A2P08572 1712 aa12.6□□□□□ -0.39
SNX1-211ENST00000560829 MGAT4DA6NG13 374 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 H3BM21 787 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 AIM2O14862 343 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 PCDH8O95206 1070 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 HOXB2P14652 356 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 GLULP15104 373 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 MAP4P27816 1152 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 PDHA2P29803 388 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 HMOX2P30519 316 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 TRIM23P36406 574 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 HTR6P50406 440 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 ERVK-8P63133 956 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 CDK3Q00526 305 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 GRSF1Q12849 480 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNX1-211ENST00000560829 ABRQ12979 859 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 SMAD4Q13485 552 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 AGKQ53H12 422 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 KIAA1161Q6NSJ0 714 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 GK5Q6ZS86 529 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 NET1Q7Z628 596 aaPredicted RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 HEATR4Q86WZ0 1026 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 CACUL1Q86Y37 369 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 FUNDC1Q8IVP5 155 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 DEFB107AQ8IZN7 70 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 DSELQ8IZU8 1212 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 MIER2Q8N344 545 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 OR2L2Q8NH16 312 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 HM13Q8TCT9 377 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 ATL1Q8WXF7 558 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 CLPTM1LQ96KA5 538 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 FOPNLQ96NB1 174 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 SLC25A23Q9BV35 468 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 TEX101Q9BY14 249 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 BRINP2Q9C0B6 783 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 DPEP2Q9H4A9 486 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 HEBP1Q9NRV9 189 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 AIG1Q9NVV5 245 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 PRPF19Q9UMS4 504 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 ZFR2Q9UPR6 939 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 CCL27Q9Y4X3 112 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 LOC730098B7Z3J9 87 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 GPR89AB7ZAQ6 455 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 PEX11AO75192 247 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 POP7O75817 140 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 CLDN9O95484 217 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 KLF8O95600 359 aaPredicted RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 DNTTP04053 509 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 GPR89BP0CG08 455 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 COL9A1P20849 921 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 CCND1P24385 295 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 ARL1P40616 181 aaPredicted RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 RPS21P63220 83 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 PCDH1Q08174 1060 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 FGL2Q14314 439 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 SMU1Q2TAY7 513 aa12.59□□□□□ -0.39
SNX1-211ENST00000560829 TRMT5Q32P41 509 aaKnown RBP12.59□□□□□ -0.39
SNX1-211ENST00000560829 MAP7D1Q3KQU3 841 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms