RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 DOCK10Q96BY6 2186 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 KLHL33A6NCF5 533 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 C2orf81A6NN90 581 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 BTN3A3O00478 584 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZG16O60844 167 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ALOX12BO75342 701 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 UQCRHP07919 91 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 CD63P08962 238 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 DCDP81605 110 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZBED6P86452 979 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 TMPRSS15P98073 1019 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 SLC1A5Q15758 541 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZNF789Q5FWF6 425 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 FIGNQ5HY92 759 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 SARM1Q6SZW1 724 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 KDELC1Q6UW63 502 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 CDHR3Q6ZTQ4 885 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 BZW1Q7L1Q6 419 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 TRIM73Q86UV7 250 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZC3H18Q86VM9 953 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 FJX1Q86VR8 437 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 AMIGO1Q86WK6 493 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 C19orf47Q8N9M1 422 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 PHC3Q8NDX5 983 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 OR52E1Q8NGJ3 308 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 DNAJB14Q8TBM8 379 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 SYN2Q92777 582 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 TADA1Q96BN2 335 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 OLFM3Q96PB7 478 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 TRAPPC9Q96Q05 1148 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 WDR77Q9BQA1 342 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 FICDQ9BVA6 458 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 PACSIN1Q9BY11 444 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 UNKQ9C0B0 810 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZNF552Q9H707 407 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ZBTB20Q9HC78 741 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ACTR10Q9NZ32 417 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 SAE1Q9UBE0 346 aaPredicted RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 DHCR7Q9UBM7 475 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 RSPH14Q9UHP6 348 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 FKBPLQ9UIM3 349 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 NOVA2Q9UNW9 492 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 LUC7L2Q9Y383 392 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 ARL5AQ9Y689 179 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 AP1M2Q9Y6Q5 423 aa10.15□□□□□ -0.78
CDC42BPB-207ENST00000560492 SNRNP200O75643 2136 aaKnown RBP10.15□□□□□ -0.79
CDC42BPB-207ENST00000560492 LOC285095A0A1B0GVY8 99 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 A0A1W2PQJ5 194 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 KLF7O75840 302 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 SRP72O76094 671 aaKnown RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 PRF1P14222 555 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 ALAS2P22557 587 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 FOXL2P58012 376 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 AIMP2Q13155 320 aaKnown RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 BCL7AQ4VC05 210 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 SP5Q6BEB4 398 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 FAM180AQ6UWF9 173 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 SPOCD1Q6ZMY3 1216 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 Q6ZS92 163 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 KCNMB4Q86W47 210 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 MCEMP1Q8IX19 187 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 ZNF655Q8N720 491 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 OR4K2Q8NGD2 314 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 OR2Y1Q8NGV0 311 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 GRHL3Q8TE85 626 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 PTERQ96BW5 349 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 HAUS1Q96CS2 278 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 MAGEB10Q96LZ2 347 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 NRTNQ99748 197 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 NDC1Q9BTX1 674 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 AP1M1Q9BXS5 423 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 SPRTNQ9H040 489 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 FAM96AQ9H5X1 160 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 EPS8L2Q9H6S3 715 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 COG4Q9H9E3 785 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 VPS37BQ9H9H4 285 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 SMOXQ9NWM0 555 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 CDC23Q9UJX2 597 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 ENTPD4Q9Y227 616 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 TDRKHQ9Y2W6 561 aaKnown RBP10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 CSAG2Q9Y5P2 127 aa10.14□□□□□ -0.79
CDC42BPB-207ENST00000560492 ZNF487B1APH4 448 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 GAPDHSO14556 408 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 ZSCAN9O15535 394 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 SPOPO43791 374 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 AGTP01019 485 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 ITGALP20701 1170 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 CD68P34810 354 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 PRLHRP49683 370 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 RIPPLY3P57055 190 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 UBASH3AP57075 661 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 MPP3Q13368 585 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 TFDP2Q14188 446 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 NR1I3Q14994 352 aa10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 PRKD1Q15139 912 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 ZRSR2Q15696 482 aaKnown RBP10.13□□□□□ -0.79
CDC42BPB-207ENST00000560492 NKAIN1Q4KMZ8 207 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms