RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 OLR1P78380 273 aa13.24□□□□□ -0.29
TRAF3-208ENST00000560371 GPR17Q13304 367 aa13.24□□□□□ -0.29
TRAF3-208ENST00000560371 GALNT5Q7Z7M9 940 aa13.24□□□□□ -0.29
TRAF3-208ENST00000560371 ENTPD5O75356 428 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 ALPIP09923 528 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 CSF2RAP15509 400 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 SCNN1AP37088 669 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 SLC1A2P43004 574 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 FSTL5Q8N475 847 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 PLEKHA1Q9HB21 404 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 PEX12O00623 359 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 DNAJA2O60884 412 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 ANPEPP15144 967 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 SLC7A1P30825 629 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 CDK9P50750 372 aaKnown RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 MFSD5Q6N075 450 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 LYSMD3Q7Z3D4 306 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 IL12RB1P42701 662 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 FAM174BQ3ZCQ3 159 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 METTL21CQ5VZV1 264 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 KBTBD2Q8IY47 623 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 TMEM145Q8NBT3 493 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 RIOK2Q9BVS4 552 aaKnown RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 DZANK1Q9NVP4 752 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 C1orf109Q9NX04 203 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 UPK3BL1B0FP48 263 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 UPK3BL2E5RIL1 263 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 ASNA1O43681 348 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 IDH3BO43837 385 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 CHRNA1P02708 482 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 ALOX5P09917 674 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 SLC10A7Q0GE19 358 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 NFATC2Q13469 925 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 OR13C4Q8NGS5 318 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 FAM192AQ9GZU8 254 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 CNTN6Q9UQ52 1028 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 DCLK1O15075 740 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 NIPSNAP2O75323 286 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 PLGP00747 810 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 PTDSS1P48651 473 aaKnown RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 KCNJ2P63252 427 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 LY6G5CQ5SRR4 150 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 CMASQ8NFW8 434 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 C8orf4Q9NR00 106 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 HAT1O14929 419 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 DBTP11182 482 aaKnown RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 PIM1P11309 404 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 RPL10P27635 214 aaKnown RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 LBX1P52954 281 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 HADHBP55084 474 aaKnown RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 MLLT6P55198 1093 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 ELF3P78545 371 aaPredicted RBP13.23□□□□□ -0.29
TRAF3-208ENST00000560371 SGCBQ16585 318 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 SLC30A6Q6NXT4 461 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 KBTBD8Q8NFY9 601 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 ALG2Q9H553 416 aa13.23□□□□□ -0.29
TRAF3-208ENST00000560371 MAGEB17A8MXT2 336 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 GABRDO14764 452 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MMP20O60882 483 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 HSD3B2P26439 372 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MNDAP41218 407 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 SIRPB2Q5JXA9 342 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 OR52J3Q8NH60 311 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 C1GALT1C1Q96EU7 318 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 TBL1XR1Q9BZK7 514 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 ADAP2Q9NPF8 381 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PDP1Q9P0J1 537 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PPEF2O14830 753 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 TP73O15350 636 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PDPK1O15530 556 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CHRNA6Q15825 494 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MYLK3Q32MK0 819 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MLIPQ5VWP3 458 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 SLC8B1Q6J4K2 584 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PDE12Q6L8Q7 609 aaKnown RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 RGMAQ96B86 450 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CDKN2AIPNLQ96HQ2 116 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 DGAT2Q96PD7 388 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 FCRL4Q96PJ5 515 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 MUC13Q9H3R2 512 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CFAP20Q9Y6A4 193 aaKnown RBP13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CAPN14A8MX76 684 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 AHCYP23526 432 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 ITPRIPL2Q3MIP1 535 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 HPS6Q86YV9 775 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 SPPL2CQ8IUH8 684 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 LRRC57Q8N9N7 239 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CAMKVQ8NCB2 501 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 C2orf71A6NGG8 1288 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 PMM2O15305 246 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 TGFB1P01137 390 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF527Q8NB42 609 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms