RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 CCSMST1Q4G0I0 132 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 MROH9Q5TGP6 573 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 NKAIN2Q5VXU1 208 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 UNC5DQ6UXZ4 953 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 NEK10Q6ZWH5 1172 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 RBM12BQ8IXT5 1001 aaKnown RBP21.2■□□□□ 0.98
SNX1-210ENST00000560260 OR5K2Q8NHB8 316 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 SH3KBP1Q96B97 665 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 LRRN3Q9H3W5 708 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 MVB12BQ9H7P6 319 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 CIDEBQ9UHD4 219 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 IKZF3Q9UKT9 509 aa21.2■□□□□ 0.98
SNX1-210ENST00000560260 EIF3FO00303 357 aaPredicted RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 NTN3O00634 580 aaPredicted RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 INHBAP08476 426 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 CBSLP0DN79 551 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 CD1CP29017 333 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 CBSP35520 551 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 CSRP3P50461 194 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 CFHR1Q03591 330 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 ILF2Q12905 390 aaKnown RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 TMPRSS9Q7Z410 1059 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 TBC1D21Q8IYX1 336 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 OR52E1Q8NGJ3 308 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 SKA2Q8WVK7 121 aaPredicted RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 ANKRD49Q8WVL7 239 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 RSC1A1Q92681 617 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 TRIT1Q9H3H1 467 aaKnown RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 POPDC3Q9HBV1 291 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 KCNK4Q9NYG8 393 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 ZNF180Q9UJW8 692 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 ATXN7L1Q9ULK2 861 aaPredicted RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 PLAGL1Q9UM63 463 aa21.19■□□□□ 0.98
SNX1-210ENST00000560260 APOBEC2Q9Y235 224 aaKnown RBP21.19■□□□□ 0.98
SNX1-210ENST00000560260 ARHGEF33A8MVX0 844 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 PSIP1O75475 530 aaKnown RBP21.18■□□□□ 0.98
SNX1-210ENST00000560260 C1orf105O95561 183 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 TUBBP07437 444 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 NDUFS1P28331 727 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 MSH2P43246 934 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 EPHA4P54764 986 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 AMZ1Q400G9 498 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 MREGQ8N565 214 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 DLG3Q92796 817 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 MENTQ9BUN1 341 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.18■□□□□ 0.98
SNX1-210ENST00000560260 SYNDIG1Q9H7V2 258 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 ADAMTS6Q9UKP5 1117 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 ICKQ9UPZ9 632 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 COLEC10Q9Y6Z7 277 aa21.18■□□□□ 0.98
SNX1-210ENST00000560260 CTIFO43310 598 aaKnown RBP21.17■□□□□ 0.98
SNX1-210ENST00000560260 ALDOAP04075 364 aaKnown RBP21.17■□□□□ 0.98
SNX1-210ENST00000560260 TYRP1P17643 537 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 MAPK9P45984 424 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 PDX1P52945 283 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 RAB10P61026 200 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 KRT33BQ14525 404 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 N4BP2L1Q5TBK1 243 aaPredicted RBP21.17■□□□□ 0.98
SNX1-210ENST00000560260 CDCP2Q5VXM1 449 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 DCUN1D3Q8IWE4 304 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 LMNTD1Q8N9Z9 388 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 OR2W6PQ8NHA6 318 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 ZFPM2Q8WW38 1151 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 ASB11Q8WXH4 323 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 TSPAN17Q96FV3 270 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 NUDT22Q9BRQ3 303 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 XKR8Q9H6D3 395 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 GPAMQ9HCL2 828 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 SNX15Q9NRS6 342 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 CTNNAL1Q9UBT7 734 aa21.17■□□□□ 0.98
SNX1-210ENST00000560260 TDRKHQ9Y2W6 561 aaKnown RBP21.17■□□□□ 0.98
SNX1-210ENST00000560260 D6RAR5 112 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 UBXN7O94888 489 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 SLC35E2BP0CK96 405 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 STMN1P16949 149 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 RGS4P49798 205 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 SERPINB9P50453 376 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 SLC12A2P55011 1212 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 IL2P60568 153 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 PLCL1Q15111 1095 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 ADGRD1Q6QNK2 874 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 USP53Q70EK8 1073 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 ADAMTS14Q8WXS8 1223 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 ISL2Q96A47 359 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 IL17FQ96PD4 163 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 UNKQ9C0B0 810 aaKnown RBP21.16■□□□□ 0.98
SNX1-210ENST00000560260 RDH14Q9HBH5 336 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 TMEM9Q9P0T7 183 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 FETUBQ9UGM5 382 aa21.16■□□□□ 0.98
SNX1-210ENST00000560260 GFYI3L273 518 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 PROS1P07225 676 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 NUDT17P0C025 328 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 MAGEA12P43365 314 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 CAPZBP47756 277 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 PPP1CAP62136 330 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 GPLD1P80108 840 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 E2F1Q01094 437 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 DLG1Q12959 904 aa21.15■□□□□ 0.98
SNX1-210ENST00000560260 HES3Q5TGS1 186 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms