RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PMEPA1Q969W9 287 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 FEM1AQ9BSK4 669 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 OSER1Q9NX31 292 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TESMINQ9Y4I5 508 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 PRORSD1PA6NEY8 169 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TM7SF2O76062 418 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ASLP04424 464 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 NFKB2Q00653 900 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 SEMA5AQ13591 1074 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ATAT1Q5SQI0 421 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 NCEH1Q6PIU2 408 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZDHHC21Q8IVQ6 265 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 FBXO16Q8IX29 292 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TMED9Q9BVK6 235 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 VNN3Q9NY84 501 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TAS2R1Q9NYW7 299 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ARHGAP20Q9P2F6 1191 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ATP6V1G1O75348 118 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 FNTBP49356 437 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TIGD2Q4W5G0 525 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TMEM145Q8NBT3 493 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 CAMK1GQ96NX5 476 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 COPS8Q99627 209 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ATP10BO94823 1461 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 B3GALT2O43825 422 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 AKAP3O75969 853 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 HSPB3Q12988 150 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 BTBD16Q32M84 506 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 OR4C15Q8NGM1 316 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 DQX1Q8TE96 717 aaKnown RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 HEBP2Q9Y5Z4 205 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC35G6P0C7Q6 338 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 GMPSP49915 693 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 CTBP2P56545 445 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 GRIK2Q13002 908 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TRIM28Q13263 835 aaKnown RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 LNX2Q8N448 690 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZMIZ2Q8NF64 920 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SMPDL3BQ92485 455 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC35G5Q96KT7 338 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 KIF20BQ96Q89 1820 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBX5Q99593 518 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 PPP1R14DQ9NXH3 145 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 OVOS2A0A0G2JMS6 1433 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 OVOS2A0A0J9YW53 1432 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 OVOS2Q6IE36 1432 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SH3PXD2BA1X283 911 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 GTF2H2Q13888 395 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 GTF2H2CQ6P1K8 395 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 DUS1LQ6P1R4 473 aaKnown RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC9B2Q86UD5 537 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 HDAC10Q969S8 669 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SEMA3CQ99985 751 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TVP23BQ9NYZ1 205 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 DPPA5A6NC42 116 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF705FA8MVS1 300 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 PDLIM1O00151 329 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF705DP0CH99 300 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF705BP0CI00 300 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TGFB3P10600 412 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 CTPS1P17812 591 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 JAGN1Q8N5M9 183 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 PIWIL1Q96J94 861 aaKnown RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 GAL3ST4Q96RP7 486 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 NDC1Q9BTX1 674 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 MECRQ9BV79 373 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 NFASCO94856 1347 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TOR1BO14657 336 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 KCNJ13O60928 360 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC7A1P30825 629 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 RYKP34925 604 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 CDH11P55287 796 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF773Q6PK81 442 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SAMD14Q8IZD0 417 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 C12orf45Q8N5I9 185 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 OR5K1Q8NHB7 308 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TERB2Q8NHR7 220 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 PNPOQ9NVS9 261 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 SPIN1Q9Y657 262 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 FAM234BA2RU67 622 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 MAGEB17A8MXT2 336 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 CELF2O95319 508 aaKnown RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TSPAN15O95858 294 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 GNB3P16520 340 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 ICAM3P32942 547 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 CDKN2CP42773 168 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 PTGR1Q14914 329 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRRC66Q68CR7 880 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 STK35Q8TDR2 534 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 TAS2R10Q9NYW0 307 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 NUDT4Q9NZJ9 180 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 VWA7Q9Y334 891 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 CDC42BPBQ9Y5S2 1711 aa13.63□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF609O15014 1411 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 PRR5-ARHGAP8B1AHC4 643 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms